RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 BFARQ9NZS9 450 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 MBD1Q9UIS9 605 aaPredicted RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 VANGL2Q9ULK5 521 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 DFFAO00273 331 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 PIAS1O75925 651 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 MOCS2O96007 188 aaPredicted RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 JCHAINP01591 159 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 POLBP06746 335 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 EPHB3P54753 998 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 CYP4F8P98187 520 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 MGAT5Q09328 741 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 LMAN2Q12907 356 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 TAF10Q12962 218 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 ANO4Q32M45 955 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 C14orf80Q86SX3 495 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 UMODL1-AS1Q8N2C9 162 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 TCP10LQ8TDR4 215 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 AGAP3Q96P47 875 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 SEPT5Q99719 369 aaPredicted RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 PAIP2Q9BPZ3 127 aaKnown RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 SLC39A8Q9C0K1 460 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 VPS11Q9H270 941 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 KDM4CQ9H3R0 1056 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 CCDC86Q9H6F5 360 aaKnown RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 FSCN3Q9NQT6 498 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 TMEM248Q9NWD8 314 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 GRID1Q9ULK0 1009 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 SLC27A5Q9Y2P5 690 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 STARD13Q9Y3M8 1113 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 PI4KAP42356 2102 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 URB1O60287 2271 aaKnown RBP17.28■□□□□ 0.36
PTPRC-206ENST00000413409 ZNF462Q96JM2 2506 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 PLXNB3Q9ULL4 1909 aa17.28■□□□□ 0.36
PTPRC-206ENST00000413409 NYNRINQ9P2P1 1898 aaKnown RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 MAGEB16A2A368 324 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 MAFKO60675 156 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 SOAT2O75908 522 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ANXA9O76027 345 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 USP1O94782 785 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 CCNB1P14635 433 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ARSAP15289 507 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 DRD1P21728 446 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 GABRR2P28476 465 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ETV4P43268 484 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ZKSCAN8Q15776 578 aaPredicted RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 CCDC117Q8IWD4 279 aaPredicted RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 STKLD1Q8NE28 680 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 PDZD8Q8NEN9 1154 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 OR52K1Q8NGK4 314 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 RIN3Q8TB24 985 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ACMSDQ8TDX5 336 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 CRELD1Q96HD1 420 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ZYG11BQ9C0D3 744 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 IL22Q9GZX6 179 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 TASP1Q9H6P5 420 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 GLOD4Q9HC38 313 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 THG1LQ9NWX6 298 aaKnown RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 MARCH2Q9P0N8 246 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 NUDT5Q9UKK9 219 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 CCL26Q9Y258 94 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 ARL2BPQ9Y2Y0 163 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
PTPRC-206ENST00000413409 SHROOM3Q8TF72 1996 aa17.27■□□□□ 0.36
PTPRC-206ENST00000413409 FAM237BA0A1B0GVD1 139 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 ANTXRLA6NF34 631 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 COPEO14579 308 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 EDF1O60869 148 aaKnown RBP17.26■□□□□ 0.35
PTPRC-206ENST00000413409 RFPL1O75677 317 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 C1QL1O75973 258 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 PYGBP11216 843 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 ADRA1DP25100 572 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 GEMP55040 296 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 CDH17Q12864 832 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 PACS1Q6VY07 963 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 TMEM135Q86UB9 458 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 C11orf74Q86VG3 221 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 RASSF3Q86WH2 238 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 CNTD1Q8N815 330 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 CCT6BQ92526 530 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 PSMG2Q969U7 264 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 CERS2Q96G23 380 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 P2RY13Q9BPV8 354 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 TRIM56Q9BRZ2 755 aaKnown RBP17.26■□□□□ 0.35
PTPRC-206ENST00000413409 NUSAP1Q9BXS6 441 aaKnown RBP17.26■□□□□ 0.35
PTPRC-206ENST00000413409 RETREG1Q9H6L5 497 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 DOCK4Q8N1I0 1966 aa17.26■□□□□ 0.35
PTPRC-206ENST00000413409 FSBPO95073 299 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 IL1BP01584 269 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 GSTA1P08263 222 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 ATF6P18850 670 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms