RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SCN3BQ9NY72 215 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 KCNE2Q9Y6J6 123 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CCDC154A6NI56 674 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TFE3P19532 575 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 WNT3AP56704 352 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 POU5F1Q01860 360 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CRYMQ14894 314 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SLC10A6Q3KNW5 377 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TXNDC8Q6A555 127 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MSANTD2Q6P1R3 559 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CYP2U1Q7Z449 544 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ADAMTSL2Q86TH1 951 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TRIM69Q86WT6 500 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 KRT73Q86Y46 540 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ARID3BQ8IVW6 561 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 OR7D4Q8NG98 312 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PHOSPHO2Q8TCD6 241 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 EPS8L3Q8TE67 593 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 VPS33AQ96AX1 596 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 IMPAD1Q9NX62 359 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TAS2R14Q9NYV8 317 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PCDHB1Q9Y5F3 818 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PITPNM1O00562 1244 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 HLA-DQA2P01906 255 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CA3P07451 260 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 EPORP19235 508 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 NDUFS1P28331 727 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ALDH4A1P30038 563 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 S100A3P33764 101 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 COPAP53621 1224 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CDK16Q00536 496 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PUS10Q3MIT2 529 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MAMDC4Q6UXC1 1216 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 POLNQ7Z5Q5 900 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SH3RF1Q7Z6J0 888 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CFAP206Q8IYR0 622 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 C2orf73Q8N5S3 287 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GDPD5Q8WTR4 605 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 KCTD13Q8WZ19 329 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PIGKQ92643 395 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LINGO1Q96FE5 620 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TEPSINQ96N21 525 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 BTBD9Q96Q07 612 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 OSBPL1AQ9BXW6 950 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ST6GALNAC4Q9H4F1 302 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CARS2Q9HA77 564 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RCOR3Q9P2K3 495 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TGFB1I1O43294 461 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 EPN2O95208 641 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RHOP08100 348 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PRLRP16471 622 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CCNCP24863 283 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MDH1P40925 334 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SLC1A6P48664 564 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MSLNQ13421 630 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PFKFB4Q16877 469 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 IYDQ6PHW0 289 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RNF19BQ6ZMZ0 732 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RNF44Q7L0R7 432 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SLC9B2Q86UD5 537 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LONP2Q86WA8 852 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 P3H2Q8IVL5 708 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RTL3Q8N8U3 475 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 OVCA2Q8WZ82 227 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SEMA4DQ92854 862 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LRRC39Q96DD0 335 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RAB11FIP5Q9BXF6 653 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CDC42EP4Q9H3Q1 356 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RERGLQ9H628 205 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ACP6Q9NPH0 428 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 COPS7AQ9UBW8 275 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ERVK-11Q9UQG0 969 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CAPN6Q9Y6Q1 641 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 DUSP10Q9Y6W6 482 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 DOT1LQ8TEK3 1739 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PEX12O00623 359 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 MLYCDO95822 493 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 FLT3P36888 993 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GUCY1A3Q02108 690 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CHRNB3Q05901 458 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 NFATC2Q13469 925 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CERCAMQ5T4B2 595 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LRRC8BQ6P9F7 803 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GDPD4Q6W3E5 623 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PLEKHM3Q6ZWE6 761 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 SLC4A11Q8NBS3 891 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GPR156Q8NFN8 814 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ATOH1Q92858 354 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 NDNQ99608 321 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 KCNN2Q9H2S1 579 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 VPS45Q9NRW7 570 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LIMD1Q9UGP4 676 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms