RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TRIM73Q86UV7 250 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 WDR5BQ86VZ2 330 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 DNAAF5Q86Y56 855 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 GALNT13Q8IUC8 556 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 UEVLDQ8IX04 471 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 DHX40Q8IX18 779 aaKnown RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 C9orf106Q8NAJ2 232 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 TDRD5Q8NAT2 981 aaKnown RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 GABPB2Q8TAK5 448 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 SGCDQ92629 289 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 KAT2AQ92830 837 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 ZNF521Q96K83 1311 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 GCNAQ96QF7 691 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 OR2A14Q96R47 310 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 APOL6Q9BWW8 343 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 ERVMER34-1Q9H9K5 563 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC35C2Q9NQQ7 365 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 DECR2Q9NUI1 292 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 ZMYM2Q9UBW7 1377 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CNOT8Q9UFF9 292 aaKnown RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 NENFQ9UMX5 172 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CCL27Q9Y4X3 112 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 UTYO14607 1347 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC22A23A1A5C7 686 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 MSI1O43347 362 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 FGBP02675 491 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 QDPRP09417 244 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 ST6GAL1P15907 406 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 RRP1P56182 461 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 RPS13P62277 151 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 UBXN2AP68543 259 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 PRPF4BQ13523 1007 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 LAMB3Q13751 1172 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 BAATQ14032 418 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 VEPH1Q14D04 833 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 SYTL3Q4VX76 610 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 TCP11X2Q5H9J9 407 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 CPLX2Q6PUV4 134 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 CFAP77Q6ZQR2 320 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 GALNTL5Q7Z4T8 443 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 TEX11Q8IYF3 940 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 CADM3Q8N126 398 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 TTC30BQ8N4P2 665 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 ARL14EPQ8N8R7 260 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 SYT2Q8N9I0 419 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 POMGNT2Q8NAT1 580 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 AVL9Q8NBF6 648 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 PRSS3P2Q8NHM4 247 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 ARHGEF26Q96DR7 871 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 PGAP3Q96FM1 320 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 VCPIP1Q96JH7 1222 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 FCRL4Q96PJ5 515 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 SRSF8Q9BRL6 282 aaKnown RBP5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 HIPK3Q9H422 1215 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 ZNF304Q9HCX3 659 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 OGFRQ9NZT2 677 aa5.09□□□□□ -1.59
HMGB1P13-201ENST00000406019 A0A0G2JK05 382 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 FAM237AA0A1B0GTK4 181 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SEC14L5O43304 696 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 NDUFS3O75489 264 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 NEURL1O76050 574 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 MT-CYBP00156 380 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SCG2P13521 617 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 MCCP23508 829 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 EEF1DP29692 281 aaKnown RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 CHRNA5P30532 468 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 MFAP4P55083 255 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 ID2Q02363 134 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF91Q05481 1191 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 MTA1Q13330 715 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 PPP2R5BQ15173 497 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 RBMS2Q15434 407 aaKnown RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 COL28A1Q2UY09 1125 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SHC4Q6S5L8 630 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 IL27RAQ6UWB1 636 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLFN11Q7Z7L1 901 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 KBTBD6Q86V97 674 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 NANOGP1Q8N7R0 232 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 POGLUT1Q8NBL1 392 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 BCAS4Q8TDM0 211 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SAT2Q96F10 170 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 NCAPGQ9BPX3 1015 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 KLHL4Q9C0H6 718 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 SETD4Q9NVD3 440 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 TAB2Q9NYJ8 693 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 HEY2Q9UBP5 337 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 CTNNAL1Q9UBT7 734 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 CARD8Q9Y2G2 431 aa5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 PTRH2Q9Y3E5 179 aaKnown RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P13-201ENST00000406019 ADAMDEC1O15204 470 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 WNT1P04628 370 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 LCKP06239 509 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ITGAXP20702 1163 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 YWHAQP27348 245 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 CAMPP49913 170 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms