RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 UPP2O95045 317 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 NDST3O95803 873 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 GOT2P00505 430 aaKnown RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 ITGAXP20702 1163 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 CLNS1AP54105 237 aaKnown RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 CCL23P55773 120 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 RPS24P62847 133 aaKnown RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 ACAP2Q15057 778 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 PDCD2Q16342 344 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 RALGPS1Q5JS13 557 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 SH2D4BQ5SQS7 431 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 NXNQ6DKJ4 435 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 ACTRT2Q8TDY3 377 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 NAF1Q96HR8 494 aaKnown RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 PRICKLE1Q96MT3 831 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 LBHD1Q9BQE6 289 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 RTKNQ9BST9 563 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 OSBPL1AQ9BXW6 950 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 UNC93B1Q9H1C4 597 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 CYP4F11Q9HBI6 524 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 CYP4F12Q9HCS2 524 aa17.96■□□□□ 0.47
CHTOP-205ENST00000403433 CORO1CQ9ULV4 474 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-205ENST00000403433 NEMP2A6NFY4 417 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 TRPC5OSA6NMA1 111 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 CLDN11O75508 207 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 CXCL10P02778 98 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 RHOCP08134 193 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 HOXB8P17481 243 aaPredicted RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 PIK3R1P27986 724 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 CORO1AP31146 461 aaKnown RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 PPARGP37231 505 aaPredicted RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 CDKN2DP55273 166 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 NSUN2Q08J23 767 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 AFAP1L2Q8N4X5 818 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 OR52K2Q8NGK3 314 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 UBXN10Q96LJ8 280 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 SUDS3Q9H7L9 328 aaPredicted RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 EML4Q9HC35 981 aaKnown RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 TRPM5Q9NZQ8 1165 aa17.95■□□□□ 0.46
CHTOP-205ENST00000403433 AFF4Q9UHB7 1163 aaKnown RBP17.95■□□□□ 0.46
CHTOP-205ENST00000403433 CCDC162PA2VCL2 907 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 A8MT66 165 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 H3BNC9 293 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CD3EAPO15446 510 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 BUD23O43709 281 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 KDELR3O43731 214 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CCNT2O60583 730 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ZMPSTE24O75844 475 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 IPO13O94829 963 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 LUC7L3O95232 432 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 EFEMP2O95967 443 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 SLC4A1P02730 911 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 THRAP10827 490 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 SLC26A3P40879 764 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 EPHB1P54762 984 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 AP2B1P63010 937 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 RFTN1Q14699 578 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 TAF12Q16514 161 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 DEFB128Q7Z7B8 93 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 SETD3Q86TU7 594 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 MYLK4Q86YV6 388 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 SLC22A9Q8IVM8 553 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 DEFB107AQ8IZN7 70 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CPSF7Q8N684 471 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PNPLA1Q8N8W4 532 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 KDM1BQ8NB78 822 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF296Q8WUU4 475 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 DNAJC9Q8WXX5 260 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 FAR2Q96K12 515 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PSKH2Q96QS6 385 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CATSPERZQ9NTU4 200 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 NMRK1Q9NWW6 199 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 RIMKLBQ9ULI2 386 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CRYL1Q9Y2S2 319 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 STC2O76061 302 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CRTAMO95727 393 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PIRTP0C851 137 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 OGNP20774 298 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF177Q13360 481 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PEX6Q13608 980 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CMPK2Q5EBM0 449 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CHST9Q7L1S5 443 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PIM3Q86V86 326 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ANKRD49Q8WVL7 239 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 IGSF21Q96ID5 467 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 LENG8Q96PV6 779 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 TRIB3Q96RU7 358 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 VN1R3Q9BXE9 311 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 PPP1R12CQ9BZL4 782 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 CDH22Q9UJ99 828 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 G3BP2Q9UN86 482 aaKnown RBP17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ACTL7AQ9Y615 435 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 WASF2Q9Y6W5 498 aa17.94■□□□□ 0.46
CHTOP-205ENST00000403433 ILVBLA1L0T0 632 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 PDE5AO76074 875 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 WISP3O95389 354 aaPredicted RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 PARNO95453 639 aaKnown RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 SEC24AO95486 1093 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms