RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 LOC100506127A0A0U1RQW1 187 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ARF4P18085 180 aaPredicted RBP16.78■□□□□ 0.28
TSC2-204ENST00000401874 TM4SF1P30408 202 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 PRKCQQ04759 706 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
TSC2-204ENST00000401874 HPS6Q86YV9 775 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 USP7Q93009 1102 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ANGPT4Q9Y264 503 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 JAK1P23458 1154 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 BLMHQ13867 455 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ZNF846Q147U1 533 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ITCHQ96J02 903 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 WDR55Q9H6Y2 383 aaPredicted RBP16.78■□□□□ 0.28
TSC2-204ENST00000401874 ATXN10Q9UBB4 475 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 IGLV3-22A0A075B6J6 115 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 A0A0J9YYE9 177 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ATP6AP2A0A1C7CYW4 349 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 GCATO75600 419 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ATP6AP2O75787 350 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 NPY5RQ15761 445 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 MZT2AQ6P582 158 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 ZYG11AQ6WRX3 759 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 METTL3Q86U44 580 aaKnown RBP16.78■□□□□ 0.28
TSC2-204ENST00000401874 DSELQ8IZU8 1212 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 CNTD1Q8N815 330 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 UBASH3BQ8TF42 649 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 SPOCK2Q92563 424 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 SYNDIG1Q9H7V2 258 aa16.78■□□□□ 0.28
TSC2-204ENST00000401874 FFAR3O14843 346 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 GPR42O15529 346 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 ADRA1BP35368 520 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 USP46P62068 366 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 SNRPD1P62314 119 aaKnown RBP16.77■□□□□ 0.28
TSC2-204ENST00000401874 BEX3Q00994 111 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 GK5Q6ZS86 529 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 CACTIN-AS1Q8N1I8 211 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
TSC2-204ENST00000401874 GIT1Q9Y2X7 761 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 CLDN5O00501 218 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 PCDH8O95206 1070 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 WEE1P30291 646 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
TSC2-204ENST00000401874 KLHL17Q6TDP4 642 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 CYP20A1Q6UW02 462 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 ELMO1Q92556 727 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 SLC39A8Q9C0K1 460 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 ZFP14Q9HCL3 533 aa16.77■□□□□ 0.28
TSC2-204ENST00000401874 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 INTS6LQ5JSJ4 861 aaKnown RBP16.77■□□□□ 0.27
TSC2-204ENST00000401874 ANKRD22Q5VYY1 191 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 GPR180Q86V85 440 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 SLC47A1Q96FL8 570 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 NLNQ9BYT8 704 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 ENTPD4Q9Y227 616 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 QSOX1O00391 747 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 MFSD11O43934 449 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 STX11O75558 287 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 IPO13O94829 963 aaKnown RBP16.77■□□□□ 0.27
TSC2-204ENST00000401874 NTSP30990 170 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 MZT2BQ6NZ67 158 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 ST13P5Q8NFI4 369 aaPredicted RBP16.77■□□□□ 0.27
TSC2-204ENST00000401874 ZHX1-C8orf76Q96EF9 292 aa16.77■□□□□ 0.27
TSC2-204ENST00000401874 ANKDD1BA6NHY2 528 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 ETS2P15036 469 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 ADSLP30566 484 aaPredicted RBP16.76■□□□□ 0.27
TSC2-204ENST00000401874 ARL2P36404 184 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 LIMK2P53671 638 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 HSPA14Q0VDF9 509 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
TSC2-204ENST00000401874 FAM47BQ8NA70 645 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 TIMMDC1Q9NPL8 285 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 KLHL1Q9NR64 748 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 FZD1Q9UP38 647 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 SLC12A4Q9UP95 1085 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 PTPN9P43378 593 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 MFSD4BQ5TF39 518 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 CCDC149Q6ZUS6 474 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 DSG4Q86SJ6 1040 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 FAM81AQ8TBF8 368 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 BORCS5Q969J3 196 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 LINGO1Q96FE5 620 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 CCDC3Q9BQI4 270 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 ZDHHC6Q9H6R6 413 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 ATP13A3Q9H7F0 1226 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 TCEA3O75764 348 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 GJB1P08034 283 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 SMIM11AP58511 58 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 MTX3Q5HYI7 312 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 SH3BP5LQ7L8J4 393 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 OR2T34Q8NGX1 318 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 OR2T3Q8NH03 318 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 FCRL2Q96LA5 508 aaPredicted RBP16.76■□□□□ 0.27
TSC2-204ENST00000401874 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.76■□□□□ 0.273e-9■■■□□ 16.2
TSC2-204ENST00000401874 GBA3Q9H227 469 aa16.76■□□□□ 0.27
TSC2-204ENST00000401874 CLEC4MQ9H2X3 399 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms