RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DHX33Q9H6R0 707 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 BLOC1S4Q9NUP1 217 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 A0A0U1RQF3 1178 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 RBM47A0AV96 593 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 RPP40O75818 363 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 S100A5P33763 92 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 FGD2Q7Z6J4 655 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PEX5LQ8IYB4 626 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 C12orf29Q8N999 325 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 OTUB2Q96DC9 234 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 HSD17B14Q9BPX1 270 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 HERC2P3Q9BVR0 1158 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 FBRSQ9HAH7 460 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 EXD2Q9NVH0 621 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ADAM30Q9UKF2 790 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 DUSP12Q9UNI6 340 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PRR23D1E9PI22 279 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 ZNF217O75362 1048 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 MATN4O95460 622 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 OTCP00480 354 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PRR23D2P0DMB1 279 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 HGFP14210 728 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 EPORP19235 508 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 NRG3P56975 720 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ELOCQ15369 112 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 BMT2Q1RMZ1 405 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TMC8Q8IU68 726 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 CAMK1DQ8IU85 385 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ZNF514Q96K75 400 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 NDC1Q9BTX1 674 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 VPS45Q9NRW7 570 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TDP1Q9NUW8 608 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 STXBP5LQ9Y2K9 1186 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 INSL5Q9Y5Q6 135 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 USP27XA6NNY8 438 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 DNALI1O14645 258 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 B3GALT2O43825 422 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 CILPO75339 1184 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 IQCF3P0C7M6 154 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ATP5A1P25705 553 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 PDSS1Q5T2R2 415 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 MFSD5Q6N075 450 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 OR6K2Q8NGY2 324 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ATOH1Q92858 354 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 SLC35C1Q96A29 364 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 NELL2Q99435 816 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 DPYSL5Q9BPU6 564 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 KCNU1A8MYU2 1149 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 AP5Z1O43299 807 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TFPIP10646 304 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PAICSP22234 425 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 KCNMA1Q12791 1236 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ZNF155Q12901 538 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 DPYSL3Q14195 570 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 SH2D3CQ8N5H7 860 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TC2NQ8N9U0 490 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 MAPK15Q8TD08 544 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 HHIPL1Q96JK4 782 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 KLHL32Q96NJ5 620 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 AGO3Q9H9G7 860 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 SLC12A4Q9UP95 1085 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TLR6Q9Y2C9 796 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 WTIPA6NIX2 430 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 CCNE2O96020 404 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 GOT1P17174 413 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 RBL1P28749 1068 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 SERPINB5P36952 375 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 HSPA13P48723 471 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 LILRA4P59901 499 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PLIN5Q00G26 463 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PWP1Q13610 501 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 MBLAC2Q68D91 279 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 CLEC17AQ6ZS10 378 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 TPRG1Q6ZUI0 275 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ADCK1Q86TW2 530 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 DENND6AQ8IWF6 608 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 UNC5BQ8IZJ1 945 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 PTCD2Q8WV60 388 aaKnown RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 DCAKDQ8WVC6 231 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 EME1Q96AY2 570 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 EXOC2Q96KP1 924 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PPP3R2Q96LZ3 170 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 KLF6Q99612 283 aaPredicted RBP7.97□□□□□ -1.13
USP47-203ENST00000399455 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 CCDC134Q9H6E4 229 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 FBXL12Q9NXK8 326 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 SIK3Q9Y2K2 1263 aa7.97□□□□□ -1.13
USP47-203ENST00000399455 PITPNM1O00562 1244 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 CSF2RAP15509 400 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TM4SF4P48230 202 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 NME5P56597 212 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 CCDC142Q17RM4 750 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 RP9Q8TA86 221 aaKnown RBP7.96□□□□□ -1.13
USP47-203ENST00000399455 CSPG4P5Q96PW8 444 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 CEP44Q9C0F1 390 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 EPN3Q9H201 632 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 PADI2Q9Y2J8 665 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 INSIG1O15503 277 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms