RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ANO5Q75V66 913 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TADA2BQ86TJ2 420 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 VPS36Q86VN1 386 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF687Q8N1G0 1237 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 KREMEN2Q8NCW0 462 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 OR13H1Q8NG92 308 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 EXT2Q93063 718 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ART5Q96L15 291 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 TUBB2BQ9BVA1 445 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 DEFB129Q9H1M3 183 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC35C2Q9NQQ7 365 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 GPRC5DQ9NZD1 345 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 MRPL15Q9P015 296 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 HACL1Q9UJ83 578 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALG6Q9Y672 507 aa6.29□□□□□ -1.4
TRAPPC13-202ENST00000399438 UMODL1Q5DID0 1318 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 COL2A1P02458 1487 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SOCS6O14544 535 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CLDN3O15551 220 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NPHS1O60500 1241 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 DDNO94850 711 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 IL1AP01583 271 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ITGA2BP08514 1039 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SNRPB2P08579 225 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYBL1P10243 752 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 HOXD8P13378 290 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ANXA8P13928 327 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CD58P19256 250 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ACAT1P24752 427 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ECHS1P30084 290 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CAPZA2P47755 286 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 JAM2P57087 298 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NKX6-1P78426 367 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ORC2Q13416 577 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 DBN1Q16643 649 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ANXA8L1Q5VT79 327 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ANGEL2Q5VTE6 544 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 FSTL4Q6MZW2 842 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC50Q8IVM0 306 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ARHGEF39Q8N4T4 335 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 HIPK4Q8NE63 616 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ADCY4Q8NFM4 1077 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 URGCPQ8TCY9 931 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SELENOSQ9BQE4 189 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRR14Q9BWN1 585 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 ADAM7Q9H2U9 754 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SMPD3Q9NY59 655 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNOT7Q9UIV1 285 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 AMFRQ9UKV5 643 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 DLGAP4Q9Y2H0 992 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 R3HDM2Q9Y2K5 976 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 TRPV2Q9Y5S1 764 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 FRMPD4Q14CM0 1322 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SCN4AP35499 1836 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NPIPB15A6NHN6 443 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 E7EVH7 732 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 UBOX5O94941 541 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 B3GALT4O96024 378 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 PDGFBP01127 241 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 WEE2P0C1S8 567 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 YY1P25490 414 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 EVI2BP34910 448 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 QARSP47897 775 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NPY4RP50391 375 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 MLLT6P55198 1093 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 TNNC1P63316 161 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SH3BP2P78314 561 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 DR1Q01658 176 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 IFFO1Q0D2I5 559 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 PGM5Q15124 567 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CRY1Q16526 586 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SNRNP35Q16560 246 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CT83Q5H943 113 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 TTC27Q6P3X3 843 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 TRIM72Q6ZMU5 477 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 FRMD7Q6ZUT3 714 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC60Q8IWA6 550 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CISD2Q8N5K1 135 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 XXYLT1Q8NBI6 393 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 FBXO25Q8TCJ0 367 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 INPP5DQ92835 1189 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 RAB3IPQ96QF0 476 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 AGPAT1Q99943 283 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC25A18Q9H1K4 315 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SYNDIG1Q9H7V2 258 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NOD2Q9HC29 1040 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNIH4Q9P003 139 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 NDUFAF4Q9P032 175 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNOT8Q9UFF9 292 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 SIPA1L1O43166 1804 aa6.28□□□□□ -1.4
TRAPPC13-202ENST00000399438 MAGEB16A2A368 324 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 GLTPD2A6NH11 291 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ARNTLO00327 626 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ACSL3O95573 720 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms