RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 PRAMEP78395 509 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 BIRC2Q13490 618 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 NRF1Q16656 503 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 SAMD4BQ5PRF9 694 aaKnown RBP13.16□□□□□ -0.3
PRAME-201ENST00000398741 MARC1Q5VT66 337 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 SPNS2Q8IVW8 549 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 ANKRD49Q8WVL7 239 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 PBXIP1Q96AQ6 731 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 PABPC5Q96DU9 382 aaKnown RBP13.16□□□□□ -0.3
PRAME-201ENST00000398741 IMP4Q96G21 291 aaKnown RBP13.16□□□□□ -0.3
PRAME-201ENST00000398741 EFHD1Q9BUP0 239 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 SP110Q9HB58 689 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 VPS45Q9NRW7 570 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 HACD3Q9P035 362 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
PRAME-201ENST00000398741 NRP2O60462 931 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 CSPG5O95196 566 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
PRAME-201ENST00000398741 MT-CO1P00395 513 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 IMPDH1P20839 514 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 CYP2R1Q6VVX0 501 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 TFAP2DQ7Z6R9 452 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 SNX31Q8N9S9 440 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 UBXN10Q96LJ8 280 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 ZCWPW1Q9H0M4 648 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 FNIP2Q9P278 1114 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
PRAME-201ENST00000398741 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 A0A1W2PQH9 124 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 H0YJX3 145 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 M0QZQ0 153 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 SLC7A4O43246 635 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 ZNF26P17031 533 aaPredicted RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 TSPAN8P19075 237 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 FGFR3P22607 806 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 YWHAQP27348 245 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 PGFP49763 221 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 INHBEP58166 350 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 KIF19Q2TAC6 998 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 FAM45BPQ6NSW5 357 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 B3GNT6Q6ZMB0 384 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 LDB1Q86U70 411 aaPredicted RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 PNPLA1Q8N8W4 532 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 OR13J1Q8NGT2 312 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 EXT2Q93063 718 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 HDAC10Q969S8 669 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.31
PRAME-201ENST00000398741 COQ10BQ9H8M1 238 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 NMUR1Q9HB89 426 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 DMTF1Q9Y222 760 aa13.15□□□□□ -0.31
PRAME-201ENST00000398741 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
PRAME-201ENST00000398741 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 CCL22O00626 93 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
PRAME-201ENST00000398741 VILLO15195 856 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 CHRNA1P02708 482 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 SLC4A1P02730 911 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 SLC7A1P30825 629 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 NDST2P52849 883 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 NRG1Q02297 640 aaPredicted RBP13.14□□□□□ -0.31
PRAME-201ENST00000398741 DSC2Q02487 901 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 SLC10A7Q0GE19 358 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 ADRM1Q16186 407 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 ZNF678Q5SXM1 525 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 GALNT7Q86SF2 657 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 OR9I1Q8NGQ6 314 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 PPWD1Q96BP3 646 aaKnown RBP13.14□□□□□ -0.31
PRAME-201ENST00000398741 C19orf60Q96EN9 201 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 HIC2Q96JB3 615 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 MFSD1Q9H3U5 465 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
PRAME-201ENST00000398741 RGS18Q9NS28 235 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms