RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 HTR1BP28222 390 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 TRIM23P36406 574 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 MMP12P39900 470 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 ETV5P41161 510 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 STAT1P42224 750 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 CSNK1DP48730 415 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 ZNF143P52747 638 aaPredicted RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 OGDHQ02218 1023 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 MTM1Q13496 603 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 CT47A1Q5JQC4 288 aaPredicted RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 CDKAL1Q5VV42 579 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 LIPIQ6XZB0 460 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 MON1BQ7L1V2 547 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 PELI3Q8N2H9 469 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 OR6C4Q8NGE1 309 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 CCL4L1Q8NHW4 92 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 ENOX1Q8TC92 643 aaKnown RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 PDXPQ96GD0 296 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 WDR92Q96MX6 357 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 SLC39A8Q9C0K1 460 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 CATSPERBQ9H7T0 1116 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 MRPL40Q9NQ50 206 aaKnown RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 UBA2Q9UBT2 640 aaPredicted RBP12.11□□□□□ -0.47
TFF3-202ENST00000398431 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
TFF3-202ENST00000398431 B4GAT1O43505 415 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 RECQL5O94762 991 aaPredicted RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 FUCA1P04066 466 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 PCCBP05166 539 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 HOXC4P09017 264 aaPredicted RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 PNLIPP16233 465 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 GLB1P16278 677 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 B4GALNT1Q00973 533 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 HLTFQ14527 1009 aaKnown RBP eCLIP12.1□□□□□ -0.47
TFF3-202ENST00000398431 GRM3Q14832 879 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 CERCAMQ5T4B2 595 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 AFMIDQ63HM1 303 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 BRAT1Q6PJG6 821 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 SRLQ86TD4 932 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 ECHDC3Q96DC8 303 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 CELF6Q96J87 481 aaKnown RBP12.1□□□□□ -0.47
TFF3-202ENST00000398431 TUBGCP5Q96RT8 1024 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 NCAPGQ9BPX3 1015 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 LGR4Q9BXB1 951 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 STRADBQ9C0K7 418 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 TMEM168Q9H0V1 697 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 FGF22Q9HCT0 170 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 PISDQ9UG56 409 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 DACH1Q9UI36 760 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 RNF215Q9Y6U7 377 aa12.1□□□□□ -0.47
TFF3-202ENST00000398431 PRAMEF33A0A0G2JMD5 474 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 AGRPO00253 132 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
TFF3-202ENST00000398431 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 SLC28A2O43868 658 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 PRAMEF10O60809 474 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 WISP1O95388 367 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 CALB1P05937 261 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 PAPOLAP51003 745 aaKnown RBP12.09□□□□□ -0.47
TFF3-202ENST00000398431 NDST2P52849 883 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 AIF1P55008 147 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 KIAA1024LP59773 190 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 KCNC4Q03721 635 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 CA9Q16790 459 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 ERAP2Q6P179 960 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 USP53Q70EK8 1073 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 SPRED1Q7Z699 444 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 TAF8Q7Z7C8 310 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 C17orf82Q86X59 251 aaPredicted RBP12.09□□□□□ -0.47
TFF3-202ENST00000398431 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 JAMLQ86YT9 394 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 SLITRK4Q8IW52 837 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 ARHGAP12Q8IWW6 846 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 OR56A4Q8NGH8 313 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 MCEEQ96PE7 176 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 AGPAT1Q99943 283 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 CNPY3Q9BT09 278 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 NUP62CLQ9H1M0 184 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 STARD5Q9NSY2 213 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
TFF3-202ENST00000398431 LRIT1Q9P2V4 623 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms