RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CLVS1Q8IUQ0 354 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CARNMT1Q8N4J0 409 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PCSK9Q8NBP7 692 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CATSPER1Q8NEC5 780 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FAM45AQ8TCE6 357 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RRN3Q9NYV6 651 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 TNRC6CQ9HCJ0 1690 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 APOL3O95236 402 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PRSS56P0CW18 603 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NCK1P16333 377 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CCNG1P51959 295 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GALNT2Q10471 571 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 DPYSQ14117 519 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 VPS26BQ4G0F5 336 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 TMEM259Q4ZIN3 620 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FAM91A1Q658Y4 838 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GDF6Q6KF10 455 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FAM180AQ6UWF9 173 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 C3orf58Q8NDZ4 430 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ADCY4Q8NFM4 1077 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 TSGA13Q96PP4 275 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PPP1R10Q96QC0 940 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SMIM14Q96QK8 99 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 WDR12Q9GZL7 423 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SENP6Q9GZR1 1112 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 COQ10BQ9H8M1 238 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ATP13A1Q9HD20 1204 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PRPF19Q9UMS4 504 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GIT1Q9Y2X7 761 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RAD54BQ9Y620 910 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SLC30A1Q9Y6M5 507 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 STX7O15400 261 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF189O75820 626 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 BAIAP3O94812 1187 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CD1EP15812 388 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 HCAR3P49019 387 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 AIF1P55008 147 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 KRT33BQ14525 404 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZBTB6Q15916 424 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 STXBP5Q5T5C0 1151 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ATG14Q6ZNE5 492 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 B3GALT6Q96L58 329 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SEMA3CQ99985 751 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 BEGAINQ9BUH8 593 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SLC25A23Q9BV35 468 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PRKD2Q9BZL6 878 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GDAP2Q9NXN4 497 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FLRT1Q9NZU1 646 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 DKK3Q9UBP4 350 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PADI3Q9ULW8 664 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 COPG1Q9Y678 874 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 DOT1LQ8TEK3 1739 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 A0A0U1RQS6 177 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PIP5K1BO14986 540 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 IRAK2O43187 625 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SIX3O95343 332 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GLDCP23378 1020 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ARRB2P32121 409 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 MAGEA6P43360 314 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PIK3CGP48736 1102 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PPP1R3AQ16821 1122 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SLC5A9Q2M3M2 681 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 MRNIPQ6NTE8 343 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PHC3Q8NDX5 983 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NAT14Q8WUY8 206 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 DNAJC1Q96KC8 554 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 OLFM1Q99784 485 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FAM86C1Q9NVL1 165 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CNOT6Q9ULM6 557 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 MTF2Q9Y483 593 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 MYH1P12882 1939 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ARL5CA6NH57 179 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 E5RI56 91 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CBX4O00257 560 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CCNT2O60583 730 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GOT2P00505 430 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RHOCP08134 193 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 EEF1DP29692 281 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CYP51A1Q16850 503 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CYS1Q717R9 158 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GATAD2AQ86YP4 633 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SIX5Q8N196 739 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SERPINB11Q96P15 392 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 C1orf21Q9H246 121 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RHBDL2Q9NX52 303 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NDUFAF1Q9Y375 327 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 MYH14Q7Z406 1995 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF487B1APH4 448 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 F5H5T6 163 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 BTN3A1O00481 513 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SLC2A4P14672 509 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 LRPAP1P30533 357 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CPOXP36551 454 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SLC7A2P52569 658 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms