RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMCC1O94876 653 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ENO3P13929 434 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PEX2P28328 305 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 LEPRP48357 1165 aaKnown RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PKNOX1P55347 436 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PTPRCAPQ14761 206 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SIRPB2Q5JXA9 342 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ARMCX6Q7L4S7 300 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ADGRG6Q86SQ4 1221 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CILP2Q8IUL8 1156 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CPSF7Q8N684 471 aaKnown RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PDCD6IPQ8WUM4 868 aaKnown RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NCSTNQ92542 709 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 USP13Q92995 863 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FBXO32Q969P5 355 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RPRD1AQ96P16 312 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MARCH4Q9P2E8 410 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 INPPL1O15357 1258 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 HK2P52789 917 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 LSAMPQ13449 338 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SFT2D3Q587I9 215 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 C10orf120Q5SQS8 335 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 HECTD2Q5U5R9 776 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KIAA0408Q6ZU52 694 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PIWIL4Q7Z3Z4 852 aaKnown RBP18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FUBP3Q96I24 572 aaKnown RBP eCLIP18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FAM193BQ96PV7 902 aaPredicted RBP18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 EBF3Q9H4W6 596 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ZBTB26Q9HCK0 441 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CRYL1Q9Y2S2 319 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 A8MT66 165 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 STX16-NPEPL1H3BU86 382 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NPHS1O60500 1241 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ACVRL1P37023 503 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 THOP1P52888 689 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ATXN3P54252 364 aaPredicted RBP18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TAF10Q12962 218 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FAM171A1Q5VUB5 890 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KBTBD6Q86V97 674 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CALML6Q8TD86 181 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CRISPLD1Q9H336 500 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 VPS45Q9NRW7 570 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 VWA8A3KMH1 1905 aa18.43■□□□□ 0.54
CHRFAM7A-202ENST00000397827 H3BNX3 289 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SDHDO14521 159 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 EOMESO95936 686 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 YWHAQP27348 245 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CDKN2DP55273 166 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PRAMEP78395 509 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SULT2A1Q06520 285 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SREBF2Q12772 1141 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 POLD3Q15054 466 aaPredicted RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PIM3Q86V86 326 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RNF168Q8IYW5 571 aaPredicted RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ATP6V0D2Q8N8Y2 350 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ARRDC2Q8TBH0 407 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GDPD5Q8WTR4 605 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 BTN2A3PQ96KV6 586 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CCDC28BQ9BUN5 200 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MARCH2Q9P0N8 246 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLC12A8A0AV02 714 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 LTA4HP09960 611 aaKnown RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TSPAN8P19075 237 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 DPP6P42658 865 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KPNA2P52292 529 aaKnown RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TRIP10Q15642 601 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 AGAP9Q5VTM2 703 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TMEM207Q6UWW9 146 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 C16orf89Q6UX73 402 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PCSK9Q8NBP7 692 aaKnown RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NPAS2Q99743 824 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GPR62Q9BZJ7 368 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 HCSTQ9UBK5 93 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 STK39Q9UEW8 545 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 VWA7Q9Y334 891 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 IGLV3-10A0A075B6K4 115 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RAMP2O60895 175 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 IPO13O94829 963 aaKnown RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PIRTP0C851 137 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CLCN5P51795 746 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GPR158Q5T848 1215 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 BNC2Q6ZN30 1099 aaPredicted RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TBATAQ96M53 351 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SEPT5Q99719 369 aaPredicted RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MUSKO15146 869 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ATXN1LP0C7T5 689 aaKnown RBP18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 XRCC1P18887 633 aaPredicted RBP18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 OR1E1P30953 314 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KCNC1P48547 511 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ACLYP53396 1101 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 AQP4P55087 323 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 DNAJB13P59910 316 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PFKPQ01813 784 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MGAT5BQ3V5L5 792 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PDSS2Q86YH6 399 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms