RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 SLC25A18Q9H1K4 315 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 GEMIN8Q9NWZ8 242 aaKnown RBP16.24■□□□□ 0.19
CUX2-202ENST00000397643 SEPT10Q9P0V9 454 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 KLQ9UEF7 1012 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 DGKBQ9Y6T7 804 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 RNF215Q9Y6U7 377 aa16.24■□□□□ 0.19
CUX2-202ENST00000397643 USP9YO00507 2555 aaPredicted RBP16.24■□□□□ 0.19
CUX2-202ENST00000397643 TSPAN11A1L157 253 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 KDELR3O43731 214 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 PNLIPP16233 465 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 GLB1P16278 677 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 HTR1BP28222 390 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 INPP5AQ14642 412 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 C16orf72Q14CZ0 275 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 AGERQ15109 404 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 C15orf59Q2T9L4 293 aaPredicted RBP16.23■□□□□ 0.19
CUX2-202ENST00000397643 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
CUX2-202ENST00000397643 WDR92Q96MX6 357 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 KLC2Q9H0B6 622 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 TEX15Q9BXT5 2789 aa16.23■□□□□ 0.19
CUX2-202ENST00000397643 ARHGEF17Q96PE2 2063 aaPredicted RBP16.23■□□□□ 0.19
CUX2-202ENST00000397643 ZSCAN5CA6NGD5 496 aaPredicted RBP16.22■□□□□ 0.19
CUX2-202ENST00000397643 TEX33O43247 280 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 BUB1O43683 1085 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 LSM8O95777 96 aaKnown RBP16.22■□□□□ 0.19
CUX2-202ENST00000397643 IGSF6O95976 241 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 CD82P27701 267 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 ARSDP51689 593 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 MAPK10P53779 464 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 BPIFB4P59827 614 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 NOMO3P69849 1222 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 ELP6Q0PNE2 266 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 HLTFQ14527 1009 aaKnown RBP eCLIP16.22■□□□□ 0.19
CUX2-202ENST00000397643 SYCP1Q15431 976 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 TAF3Q5VWG9 929 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 NOP9Q86U38 636 aaKnown RBP16.22■□□□□ 0.19
CUX2-202ENST00000397643 ZSCAN1Q8NBB4 408 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 OR1E3Q8WZA6 343 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 ERGIC2Q96RQ1 377 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 CMKLR1Q99788 373 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 SLC12A9Q9BXP2 914 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 TRIM5Q9C035 493 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 XPO4Q9C0E2 1151 aaKnown RBP16.22■□□□□ 0.19
CUX2-202ENST00000397643 B3GNT4Q9C0J1 378 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 PDCL3Q9H2J4 239 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 SEMA6CQ9H3T2 930 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 FGF22Q9HCT0 170 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 PCDH12Q9NPG4 1184 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
CUX2-202ENST00000397643 ANKMY1Q9P2S6 941 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 LHX3Q9UBR4 397 aa16.22■□□□□ 0.19
CUX2-202ENST00000397643 TMEM202A6NGA9 273 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 PIGNO95427 931 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 PCCBP05166 539 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 MMP12P39900 470 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 SUOXP51687 545 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 RHOAP61586 193 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 RAD51Q06609 339 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 MTM1Q13496 603 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 CDO1Q16878 200 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 C14orf28Q4W4Y0 310 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 ZSWIM9Q86XI8 627 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 CCDC185Q8N715 623 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 PLA2G15Q8NCC3 412 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 CASKIN2Q8WXE0 1202 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 PMEPA1Q969W9 287 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 FUBP1Q96AE4 644 aaKnown RBP16.21■□□□□ 0.19
CUX2-202ENST00000397643 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 EXOC2Q96KP1 924 aa16.21■□□□□ 0.19
CUX2-202ENST00000397643 USP9XQ93008 2570 aaPredicted RBP16.21■□□□□ 0.18
CUX2-202ENST00000397643 SPTAN1Q13813 2472 aaKnown RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 TNFP01375 233 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 PLEKP08567 350 aaPredicted RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 CCL4P13236 92 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 LIG3P49916 1009 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 HDAC4P56524 1084 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 KIAA1024LP59773 190 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 B4GALNT1Q00973 533 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 UGP2Q16851 508 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 PHF19Q5T6S3 580 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 NAA35Q5VZE5 725 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 RXFP2Q8WXD0 754 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 CENPIQ92674 756 aaPredicted RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 EPN3Q9H201 632 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 MRPL40Q9NQ50 206 aaKnown RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 LRIT1Q9P2V4 623 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 SIK3Q9Y2K2 1263 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 FHOD1Q9Y613 1164 aa16.2■□□□□ 0.18
CUX2-202ENST00000397643 ZFC3H1O60293 1989 aaKnown RBP16.2■□□□□ 0.18
CUX2-202ENST00000397643 CLEC18AA5D8T8 446 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 C2CD4BA6NLJ0 364 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms