RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SGF29Q96ES7 293 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 GDAP1L1Q96MZ0 367 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM74Q96NL1 305 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 SEMA3CQ99985 751 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TUBGCP2Q9BSJ2 902 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 APOOQ9BUR5 198 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 STK33Q9BYT3 514 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 EDEM3Q9BZQ6 932 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 SEPT10Q9P0V9 454 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 GPR34Q9UPC5 381 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CFAP69A5D8W1 941 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 C2CD4BA6NLJ0 364 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 D6RAR5 112 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 CASC3O15234 703 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 ARHGAP6O43182 974 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 TMCC1O94876 653 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 IGSF6O95976 241 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 TNFP01375 233 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 PNLIPP16233 465 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 ITIH2P19823 946 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 XPAP23025 273 aaPredicted RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 SRP54P61011 504 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 RHOAP61586 193 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 INPP5AQ14642 412 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 GRM3Q14832 879 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 NFATC4Q14934 902 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 UGP2Q16851 508 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 ALG11Q2TAA5 492 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 WSCD2Q2TBF2 565 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 LINC00303Q3SY05 128 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 MIIPQ5JXC2 388 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 NAA35Q5VZE5 725 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 ENPP7Q6UWV6 458 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 LEKR1Q6ZMV7 388 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 B3GNT8Q7Z7M8 397 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 NOP9Q86U38 636 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 EMC1Q8N766 993 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 GPR156Q8NFN8 814 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 NTAN1Q96AB6 310 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 CCDC74AQ96AQ1 378 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 TBC1D31Q96DN5 1066 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 ZNF641Q96N77 438 aaPredicted RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 WRAP53Q9BUR4 548 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 MAGEB5Q9BZ81 275 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 B3GNT4Q9C0J1 378 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 LRRN3Q9H3W5 708 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 EPB41L5Q9HCM4 733 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 METTL5Q9NRN9 209 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 DONSONQ9NYP3 566 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 IL17BQ9UHF5 180 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 APPL1Q9UKG1 709 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 HEMK1Q9Y5R4 338 aaPredicted RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 DGKBQ9Y6T7 804 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
CAPN3-208ENST00000397204 KIF26BQ2KJY2 2108 aa8.83□□□□□ -1
CAPN3-208ENST00000397204 UNC13CQ8NB66 2214 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 NBASA2RRP1 2371 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 A0A1W2PQM1 296 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 TNFRSF10CO14798 259 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 CYP1A1P04798 512 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 RPLP0P05388 317 aaKnown RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 CELA2BP08218 269 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 MMEP08473 750 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 HOXC4P09017 264 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 JMJD7P0C870 316 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 LIPCP11150 499 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 KRT3P12035 628 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 GLB1P16278 677 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 RFC1P35251 1148 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 CDR2Q01850 454 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 PTSQ03393 145 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 ZFP36L1Q07352 338 aaKnown RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 NFATC3Q12968 1075 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 MTM1Q13496 603 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 IRF4Q15306 451 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 TGIF1Q15583 401 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 CAMK4Q16566 473 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 CDO1Q16878 200 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 C15orf59Q2T9L4 293 aaPredicted RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 PARP15Q460N3 678 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 RAB6CQ53S08 254 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 ERAP2Q6P179 960 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 TRIM72Q6ZMU5 477 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 RD3Q7Z3Z2 195 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 SLFN11Q7Z7L1 901 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 ZNF354CQ86Y25 554 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 JAMLQ86YT9 394 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 UMODL1-AS1Q8N2C9 162 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 RTL3Q8N8U3 475 aaKnown RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 ZSCAN1Q8NBB4 408 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 KYQ8NBH2 561 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 FAM46DQ8NEK8 389 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 PCDH19Q8TAB3 1148 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 GPT2Q8TD30 523 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 FAM172AQ8WUF8 416 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 HMCESQ96FZ2 354 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 WDR92Q96MX6 357 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms