RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 ZSCAN5BA6NJL1 495 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 SNTNA6NMZ2 147 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 AURKAO14965 403 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 HOXC11O43248 304 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 CHMP2AO43633 222 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 BCAS1O75363 584 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 TIPRLO75663 272 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 UPK1BO75841 260 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 NADKO95544 446 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 CCNE2O96020 404 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 APRTP07741 180 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 KRT19P08727 400 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CCDC159P0C7I6 412 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 PCNAP12004 261 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CYBAP13498 195 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 PRKCAP17252 672 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CKMT2P17540 419 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 POLR2CP19387 275 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 NR4A1P22736 598 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ETV3P41162 512 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CASP3P42574 277 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ATXN3P54252 364 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 TPD52P55327 224 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 RPL7AP62424 266 aaKnown RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 CACNB2Q08289 660 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 GALNT1Q10472 559 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 CDK10Q15131 360 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 HIST2H2ACQ16777 129 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 ZFP69Q49AA0 526 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 CYP4A22Q5TCH4 519 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 LIPMQ5VYY2 423 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 GTF2IRD2BQ6EKJ0 949 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 HMBOX1Q6NT76 420 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 NEK5Q6P3R8 708 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 TMEM270Q6UE05 265 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 GTF2IRD2Q86UP8 949 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ELMOD2Q8IZ81 293 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 LXNQ9BS40 222 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 BDH2Q9BUT1 245 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 FTHL17Q9BXU8 183 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 KATNBL1Q9H079 304 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 TRIT1Q9H3H1 467 aaKnown RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 AGPAT4Q9NRZ5 378 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 DDX28Q9NUL7 540 aaKnown RBP9.94□□□□□ -0.82
APTX-207ENST00000397172 ASNSD1Q9NWL6 643 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CNTN6Q9UQ52 1028 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 PCDHGA3Q9Y5H0 932 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 CNTNAP2Q9UHC6 1331 aa9.94□□□□□ -0.82
APTX-207ENST00000397172 GOLGA8IPA6NC78 632 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 GOLGA8JA6NMD2 632 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 PDZK1P1A8MUH7 402 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 NEMP1O14524 444 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 KCNN4O15554 427 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 MSCO60682 206 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 CABYRO75952 493 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 SEC24AO95486 1093 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 ZNF865P0CJ78 1059 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 PGAM1P18669 254 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 MSX2P35548 267 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 MAGEA3P43357 314 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 CLK3P49761 638 aaKnown RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 PLA2G16P53816 162 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 YWHAEP62258 255 aaKnown RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 TAGLNQ01995 201 aaKnown RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 TNK2Q07912 1038 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 DMP1Q13316 513 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 CBX2Q14781 532 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 GLRA4Q5JXX5 417 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 XKRXQ6PP77 449 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 USP51Q70EK9 711 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 PRSS48Q7RTY5 328 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 ADAMTSL2Q86TH1 951 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 DDIASQ8IXT1 998 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 TBC1D21Q8IYX1 336 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 CLYBLQ8N0X4 340 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 TAB3Q8N5C8 712 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 CMASQ8NFW8 434 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 POMGNT1Q8WZA1 660 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 SLCO4A1Q96BD0 722 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 SDCCAG3Q96C92 435 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 RIT2Q99578 217 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 RHOBTB2Q9BYZ6 727 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 LHPPQ9H008 270 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 IRF2BPLQ9H1B7 796 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 RNPEPQ9H4A4 650 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
APTX-207ENST00000397172 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 SMYD2Q9NRG4 433 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 SNTG2Q9NY99 539 aa9.93□□□□□ -0.82
APTX-207ENST00000397172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.93□□□□□ -0.82
APTX-207ENST00000397172 CD300AQ9UGN4 299 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms