RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 WASF2Q9Y6W5 498 aa13.67□□□□□ -0.22
MCF2L-209ENST00000397036 CXorf49A8MYA2 514 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-209ENST00000397036 POC1B-GALNT4F8VUJ3 575 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 RNF40O75150 1001 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 PRNPP04156 253 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 INHBAP08476 426 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-209ENST00000397036 NFKBIAP25963 317 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 ARNTP27540 789 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 CTHP32929 405 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 KDSRQ06136 332 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 ZNF234Q14588 700 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 HABP4Q5JVS0 413 aaKnown RBP13.66□□□□□ -0.22
MCF2L-209ENST00000397036 C9orf64Q5T6V5 341 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 TEDDM1Q5T9Z0 273 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 KIAA0408Q6ZU52 694 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 GALNT7Q86SF2 657 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 KCNMB4Q86W47 210 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 RYBPQ8N488 228 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-209ENST00000397036 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 PPM1NQ8N819 430 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 OR13J1Q8NGT2 312 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 OR6K2Q8NGY2 324 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 BLOC1S5Q8TDH9 187 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 CPNE1Q99829 537 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 NLE1Q9NVX2 485 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-209ENST00000397036 SENP1Q9P0U3 644 aa13.66□□□□□ -0.22
MCF2L-209ENST00000397036 IQANK1A0A1B0GTG1 560 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SPECC1L-ADORA2AF8WAN1 911 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 H7C0S8 307 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 PIGNO95427 931 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SLC8A1P32418 973 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 HMGCLP35914 325 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SLCO1A2P46721 670 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SUOXP51687 545 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 ZNF140P52738 457 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 PTPN5P54829 565 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SEPT6Q14141 434 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 ELAVL3Q14576 367 aaKnown RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 CDKN3Q16667 212 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 GRTP1Q5TC63 336 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 CTAGE3PQ8IX95 158 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 CHST14Q8NCH0 376 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 MDGA1Q8NFP4 955 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 GPR150Q8NGU9 434 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 TTC8Q8TAM2 541 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 PDCD6IPQ8WUM4 868 aaKnown RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 MTBPQ96DY7 904 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 MFSD1Q9H3U5 465 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 C20orf96Q9NUD7 363 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-209ENST00000397036 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 IL36AQ9UHA7 158 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 HCN2Q9UL51 889 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 SZT2Q5T011 3432 aa13.65□□□□□ -0.22
MCF2L-209ENST00000397036 CAPN8A6NHC0 703 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 RPP40O75818 363 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 KRT37O76014 449 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 KRT38O76015 456 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 VAPBO95292 243 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SNRPAP09012 282 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ERVK-10P10266 1014 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 C7P10643 843 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 CHRM1P11229 460 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 DRD1P21728 446 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 OAS2P29728 719 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 GKP32189 559 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 GP5P40197 560 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 HADHAP40939 763 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 KIR2DL1P43626 348 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 EFTUD2Q15029 972 aaKnown RBP eCLIP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 UGP2Q16851 508 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF805Q5CZA5 627 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 TMEM196Q5HYL7 178 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 NEPROQ6NW34 567 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 TPRG1Q6ZUI0 275 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 USP45Q70EL2 814 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 GLT6D1Q7Z4J2 308 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 CYP4X1Q8N118 509 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 CBARPQ8N350 705 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 FAM129BQ96TA1 746 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 FAM167BQ9BTA0 163 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 MCMBPQ9BTE3 642 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 CENPHQ9H3R5 247 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 ZDHHC6Q9H6R6 413 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 FBRSL1Q9HCM7 1045 aaKnown RBP13.64□□□□□ -0.23
MCF2L-209ENST00000397036 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
MCF2L-209ENST00000397036 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms