RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ZNF641Q96N77 438 aaPredicted RBP13.36□□□□□ -0.27
RPA3-202ENST00000396682 CCNL2Q96S94 520 aaPredicted RBP13.36□□□□□ -0.27
RPA3-202ENST00000396682 CNPY3Q9BT09 278 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 SLC39A8Q9C0K1 460 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 LRRN3Q9H3W5 708 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 FGF22Q9HCT0 170 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
RPA3-202ENST00000396682 FANCLQ9NW38 375 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 ACSL6Q9UKU0 697 aa13.36□□□□□ -0.27
RPA3-202ENST00000396682 TLN1Q9Y490 2541 aaKnown RBP13.36□□□□□ -0.27
RPA3-202ENST00000396682 MAST4O15021 2626 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 ARHGEF17Q96PE2 2063 aaPredicted RBP13.35□□□□□ -0.27
RPA3-202ENST00000396682 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
RPA3-202ENST00000396682 NDST2P52849 883 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
RPA3-202ENST00000396682 TPI1P60174 286 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 GRM3Q14832 879 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 CA9Q16790 459 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 ERAP2Q6P179 960 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 CCNJLQ8IV13 435 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 PELI3Q8N2H9 469 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 ECHDC3Q96DC8 303 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 AGPAT1Q99943 283 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
RPA3-202ENST00000396682 CHMP5Q9NZZ3 219 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 APPL1Q9UKG1 709 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 SPTA1P02549 2419 aa13.35□□□□□ -0.27
RPA3-202ENST00000396682 HECTD1Q9ULT8 2610 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
RPA3-202ENST00000396682 TNFP01375 233 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 GLB1P16278 677 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 CSNK1DP48730 415 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 KIAA1024LP59773 190 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 ZFP36L1Q07352 338 aaKnown RBP13.34□□□□□ -0.27
RPA3-202ENST00000396682 LINC00303Q3SY05 128 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 CFAP58Q5T655 872 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 AFMIDQ63HM1 303 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 LIPIQ6XZB0 460 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 ARHGAP36Q6ZRI8 547 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 SPRED1Q7Z699 444 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 SRLQ86TD4 932 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 JAMLQ86YT9 394 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 MCOLN2Q8IZK6 566 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 NPWQ8N729 165 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 Q8N9G6 341 aaPredicted RBP13.34□□□□□ -0.27
RPA3-202ENST00000396682 EXD3Q8N9H8 876 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 ATL2Q8NHH9 583 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 CCL4L1Q8NHW4 92 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 LGR4Q9BXB1 951 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 STRADBQ9C0K7 418 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
RPA3-202ENST00000396682 PISDQ9UG56 409 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 LOXL2Q9Y4K0 774 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 RNF215Q9Y6U7 377 aa13.34□□□□□ -0.27
RPA3-202ENST00000396682 CFAP69A5D8W1 941 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 ANKRD62A6NC57 917 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 AGRPO00253 132 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 TRAFD1O14545 582 aaPredicted RBP13.33□□□□□ -0.28
RPA3-202ENST00000396682 PALMO75781 387 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 ITIH1P19827 911 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 SERPINA4P29622 427 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 HTR7P34969 479 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 TRIM23P36406 574 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 ETV5P41161 510 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPA3-202ENST00000396682 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
RPA3-202ENST00000396682 DPPA4Q7L190 304 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
RPA3-202ENST00000396682 FAM46DQ8NEK8 389 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 PCMTD1Q96MG8 357 aaPredicted RBP13.33□□□□□ -0.28
RPA3-202ENST00000396682 TMEM74Q96NL1 305 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 TMEM168Q9H0V1 697 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 ATP13A3Q9H7F0 1226 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
RPA3-202ENST00000396682 AP4E1Q9UPM8 1137 aa13.33□□□□□ -0.28
RPA3-202ENST00000396682 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
RPA3-202ENST00000396682 ARHGAP42A6NI28 874 aa13.32□□□□□ -0.28
RPA3-202ENST00000396682 CACNB4O00305 520 aaPredicted RBP13.32□□□□□ -0.28
RPA3-202ENST00000396682 EEF2KO00418 725 aaKnown RBP13.32□□□□□ -0.28
RPA3-202ENST00000396682 NVLO15381 856 aaKnown RBP13.32□□□□□ -0.28
RPA3-202ENST00000396682 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
RPA3-202ENST00000396682 TPM2P07951 284 aa13.32□□□□□ -0.28
RPA3-202ENST00000396682 HOXC4P09017 264 aaPredicted RBP13.32□□□□□ -0.28
RPA3-202ENST00000396682 ELFN1P0C7U0 828 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms