RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 C6orf106Q9H6K1 298 aaPredicted RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 EIF2B3Q9NR50 452 aaKnown RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 RAB6BQ9NRW1 208 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 B4GALT6Q9UBX8 382 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 FAM47DPA6NHR8 397 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 PSMD11O00231 422 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 NEMP1O14524 444 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RNGTTO60942 597 aaKnown RBP16.49■□□□□ 0.23
AP1S3-202ENST00000396653 PCDH8O95206 1070 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ATXN1LP0C7T5 689 aaKnown RBP16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ZNF30P17039 623 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 DPP6P42658 865 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 PPP2CBP62714 309 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
AP1S3-202ENST00000396653 PPP2CAP67775 309 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 GALNT3Q14435 633 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 SLC1A5Q15758 541 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 TMEM259Q4ZIN3 620 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 LRRC73Q5JTD7 316 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RANBP10Q6VN20 620 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 PRUNE1Q86TP1 453 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 SLC41A1Q8IVJ1 513 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 KLHL7Q8IXQ5 586 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RAVER1Q8IY67 606 aaKnown RBP16.49■□□□□ 0.23
AP1S3-202ENST00000396653 CXorf40AQ8TE69 158 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ASB12Q8WXK4 309 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 FICDQ9BVA6 458 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ARNT2Q9HBZ2 717 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 GGT7Q9UJ14 662 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 RAB23Q9ULC3 237 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ITM2BQ9Y287 266 aa16.49■□□□□ 0.23
AP1S3-202ENST00000396653 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
AP1S3-202ENST00000396653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 A0A1W2PQU0 124 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 MEI4A8MW99 385 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 E7EVH7 732 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 SUN1O94901 812 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 HEXIM1O94992 359 aaKnown RBP16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PRKCGP05129 697 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 IGHV4-34P06331 123 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PTGIRP43119 386 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 FAM193AP78312 1265 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 DR1Q01658 176 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PTK6Q13882 451 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 AGERQ15109 404 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PPP1R7Q15435 360 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 WDR45BQ5MNZ6 344 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 FAXCQ5TGI0 409 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 LYSMD4Q5XG99 296 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PRR23BQ6ZRT6 265 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 LINC00523Q86TU6 105 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 TMEFF1Q8IYR6 380 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 DNASE2BQ8WZ79 361 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 BIRC7Q96CA5 298 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 HSPA12BQ96MM6 686 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 TBL1YQ9BQ87 522 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 MAGEE1Q9HCI5 957 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 HACD3Q9P035 362 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
AP1S3-202ENST00000396653 ZFR2Q9UPR6 939 aaKnown RBP16.48■□□□□ 0.23
AP1S3-202ENST00000396653 DMTF1Q9Y222 760 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 MYLKQ15746 1914 aa16.48■□□□□ 0.23
AP1S3-202ENST00000396653 PRR23AA6NEV1 266 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 NPIPB15A6NHN6 443 aaPredicted RBP16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ALPIP09923 528 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ELFN1P0C7U0 828 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 CTPS1P17812 591 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ITIH2P19823 946 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 TPSB2P20231 275 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 HNF1BP35680 557 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 MAGEA6P43360 314 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
AP1S3-202ENST00000396653 CDK16Q00536 496 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 GPS1Q13098 491 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ARHGEF7Q14155 803 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 TPSAB1Q15661 275 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 CNGA3Q16281 694 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ZNF284Q2VY69 593 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 SETMARQ53H47 684 aaPredicted RBP16.47■□□□□ 0.23
AP1S3-202ENST00000396653 SIRPB2Q5JXA9 342 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 SYCP2LQ5T4T6 812 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 LIPIQ6XZB0 460 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 JAMLQ86YT9 394 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
AP1S3-202ENST00000396653 DENND6BQ8NEG7 585 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 KRT12Q99456 494 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 C1QTNF2Q9BXJ5 285 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 TRABDQ9H4I3 376 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 KCTD5Q9NXV2 234 aa16.47■□□□□ 0.23
AP1S3-202ENST00000396653 ZNF106Q9H2Y7 1883 aaKnown RBP16.47■□□□□ 0.23
AP1S3-202ENST00000396653 TP53BP1Q12888 1972 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 A0A1W2PPC4 97 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms