RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SLC12A3P55017 1021 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 MARSP56192 900 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 METTL7BQ6UX53 244 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 AMIGO2Q86SJ2 522 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 RAD51AP1Q96B01 352 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 C1GALT1C1Q96EU7 318 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ASB7Q9H672 318 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ADGRE2Q9UHX3 823 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TIMM13Q9Y5L4 95 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 CTSEP14091 401 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 NOS2P35228 1153 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 CAP2P40123 477 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 POLNQ7Z5Q5 900 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 ADAMTSL2Q86TH1 951 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 GRPEL2Q8TAA5 225 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 HOPXQ9BPY8 73 aaPredicted RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 VIRMAQ69YN4 1812 aaKnown RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 E9PCH4 1651 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 DDX3YO15523 660 aaKnown RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 ZSCAN5DPP0CG00 497 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 CCNB1P14635 433 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 ENPEPQ07075 957 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 SLC20A2Q08357 652 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 LLGL2Q6P1M3 1020 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 ADGRG2Q8IZP9 1017 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 FAM86B1E9PN63 330 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 SLC22A3O75751 556 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 SNRPD1P62314 119 aaKnown RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 POU5F1Q01860 360 aaKnown RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.16
COL4A3-202ENST00000396578 PYHIN1Q6K0P9 492 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 GPR156Q8NFN8 814 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 SUN5Q8TC36 379 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 HM13Q8TCT9 377 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 CLIP3Q96DZ5 547 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 PGLYRP2Q96PD5 576 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 SOHLH2Q9NX45 425 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 RAB26Q9ULW5 256 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 GRIP1Q9Y3R0 1128 aa14.02□□□□□ -0.16
COL4A3-202ENST00000396578 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 FAM86C2PA6NEL3 165 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 MAP2K7O14733 419 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 LIASO43766 372 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 ZBTB11O95625 1053 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 CCNE2O96020 404 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 KLRC2P26717 231 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 PQLC1Q8N2U9 271 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 ZDHHC15Q96MV8 337 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 NDNQ99608 321 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 FUCA2Q9BTY2 467 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 ACE2Q9BYF1 805 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 EXO5Q9H790 373 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 NOL11Q9H8H0 719 aaKnown RBP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 NOS1APO75052 506 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-202ENST00000396578 C10orf107Q8IVU9 208 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 CYP4X1Q8N118 509 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 FAM47BQ8NA70 645 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 OR12D3Q9UGF7 316 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 BTRCQ9Y297 605 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 FAM172BPA6NC97 362 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 LACTBL1A8MY62 500 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 QSOX1O00391 747 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 DRD4P21917 467 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 AXLP30530 894 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 GABRB2P47870 512 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 GRIK4Q16099 956 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 C16orf59Q7L2K0 433 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 ZBTB46Q86UZ6 589 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 PDPRQ8NCN5 879 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 AASDHPPTQ9NRN7 309 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 MAT2BQ9NZL9 334 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.17
COL4A3-202ENST00000396578 TPD52L2O43399 206 aaKnown RBP14.01□□□□□ -0.17
COL4A3-202ENST00000396578 MEA1Q16626 185 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 STYK1Q6J9G0 422 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 SLC27A1Q6PCB7 646 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 GPR180Q86V85 440 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 TNFAIP8L1Q8WVP5 186 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CCDC28BQ9BUN5 200 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 C2orf49Q9BVC5 232 aaPredicted RBP14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CSH1P0DML2 217 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CSH2P0DML3 217 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CTSKP43235 329 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 THOP1P52888 689 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 CDH8P55286 799 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 BST1Q10588 318 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 LCN1P1Q5VSP4 162 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 TNS4Q8IZW8 715 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 TRIM2Q9C040 744 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 EHD4Q9H223 541 aa14.01□□□□□ -0.17
COL4A3-202ENST00000396578 OAS3Q9Y6K5 1087 aaKnown RBP14.01□□□□□ -0.17
COL4A3-202ENST00000396578 EPHA3P29320 983 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms