RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 STAT1P42224 750 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 NSFP46459 744 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 NDST2P52849 883 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 PIM3Q86V86 326 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 Q8N9G6 341 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 C3orf20Q8ND61 904 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 EIF3CQ99613 913 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 SELENOOQ9BVL4 669 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 ADNPQ9H2P0 1102 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 ATP13A3Q9H7F0 1226 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 LHX3Q9UBR4 397 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 COQ6Q9Y2Z9 468 aa17.61■□□□□ 0.41
EXOSC3-202ENST00000396521 CHD5Q8TDI0 1954 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 KIF26BQ2KJY2 2108 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 UBR5O95071 2799 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 PRAMEF33A0A0G2JMD5 474 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 SIGLEC16A6NMB1 481 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 HGSO14964 777 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 CASC3O15234 703 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 PRAMEF10O60809 474 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 CPNE6O95741 557 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 HGFP14210 728 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 TRIM23P36406 574 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 FMO1Q01740 532 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 CYTH1Q15438 398 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 ZNF574Q6ZN55 896 aaPredicted RBP17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 SLITRK4Q8IW52 837 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 C11orf70Q9BRQ4 267 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 DPEP2Q9H4A9 486 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 ADAM22Q9P0K1 906 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 RNF215Q9Y6U7 377 aa17.6■□□□□ 0.41
EXOSC3-202ENST00000396521 STMND1H3BQB6 276 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 INSIG1O15503 277 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 RECQL5O94762 991 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 PIGNO95427 931 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 PCCBP05166 539 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 SOX5P35711 763 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 ATP1A2P50993 1020 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 ZNF143P52747 638 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 NSUN2Q08J23 767 aaKnown RBP eCLIP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 TRA2AQ13595 282 aaKnown RBP eCLIP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 TBR1Q16650 682 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 RAB6CQ53S08 254 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 WDR59Q6PJI9 974 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 PHF13Q86YI8 300 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 CCDC112Q8NEF3 446 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 SLC30A5Q8TAD4 765 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 GPBAR1Q8TDU6 330 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 USP7Q93009 1102 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 FUBP1Q96AE4 644 aaKnown RBP17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 PDXPQ96GD0 296 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 DPYSL5Q9BPU6 564 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 RAB6CQ9H0N0 254 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 SLC25A18Q9H1K4 315 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 SEPT3Q9UH03 358 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 PTPN13Q12923 2485 aa17.59■□□□□ 0.41
EXOSC3-202ENST00000396521 A0A1W2PQ67 120 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 CREB3O43889 395 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 PRAMEF11O60813 436 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 GFPT2O94808 682 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 TPM2P07951 284 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 ELFN1P0C7U0 828 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 UNGP13051 313 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 CHRNB2P17787 502 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 ITIH1P19827 911 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 NFKBIAP25963 317 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 GPR3P46089 330 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 PTP4A2Q12974 167 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 RFTN1Q14699 578 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 SYCP1Q15431 976 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 TCP11X2Q5H9J9 407 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 PHF19Q5T6S3 580 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 SPECC1LQ69YQ0 1117 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 SLC20A1Q8WUM9 679 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 OR1E3Q8WZA6 343 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 ECHDC3Q96DC8 303 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 CNPY3Q9BT09 278 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 MAGEB5Q9BZ81 275 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 KLC2Q9H0B6 622 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 WDR26Q9H7D7 661 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 PDFQ9HBH1 243 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 FGF22Q9HCT0 170 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 PCDHGA3Q9Y5H0 932 aa17.58■□□□□ 0.4
EXOSC3-202ENST00000396521 TMEM202A6NGA9 273 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 ARHGAP42A6NI28 874 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 PYCARD-AS1I3L0S3 204 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 CAPN5O15484 640 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 FAM87AP0C7U9 286 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 MAPK10P53779 464 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 B4GALNT1Q00973 533 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 BCL2L1Q07817 233 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 NR1D2Q14995 579 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms