RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PELI3Q8N2H9 469 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 BOCQ9BWV1 1114 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 NRSN2Q9GZP1 204 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 ABCG4Q9H172 646 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 NOD2Q9HC29 1040 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 LRP4O75096 1905 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 MYO1FO00160 1098 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 TOR1BO14657 336 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 TPP1O14773 563 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 GP1BAP07359 652 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 CR2P20023 1033 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 GJC1P36383 396 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 PEX5P50542 639 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 DUSP3P51452 185 aaPredicted RBP18.39■□□□□ 0.53
FXN-203ENST00000396366 RENBPP51606 427 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 ARSEP51690 589 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 AP1S1P61966 158 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 ZNF235Q14590 738 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 PERM1Q5SV97 790 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 SLC35F3Q8IY50 421 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 ZNF564Q8TBZ8 553 aaPredicted RBP18.39■□□□□ 0.53
FXN-203ENST00000396366 MAPK15Q8TD08 544 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 PDCD6IPQ8WUM4 868 aaKnown RBP18.39■□□□□ 0.53
FXN-203ENST00000396366 LRRN4Q8WUT4 740 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 IQCDQ96DY2 449 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 USP29Q9HBJ7 922 aa18.39■□□□□ 0.53
FXN-203ENST00000396366 IGSF10Q6WRI0 2623 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 RP1P56715 2156 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 COL27A1Q8IZC6 1860 aaPredicted RBP18.38■□□□□ 0.53
FXN-203ENST00000396366 TMEM110-MUSTN1A8MSY1 372 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 LMO7DNF2Z398 122 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 BRINP1O60477 761 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 ANXA6P08133 673 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 ELFN1P0C7U0 828 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
FXN-203ENST00000396366 HK3P52790 923 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 TAS2R40P59535 323 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 POLR2LP62875 67 aaKnown RBP18.38■□□□□ 0.53
FXN-203ENST00000396366 NFATC4Q14934 902 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 NR0B2Q15466 257 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 DPPA4Q7L190 304 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 ATPAF2Q8N5M1 289 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 FAM71BQ8TC56 605 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 SCUBE2Q9NQ36 999 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 CTTNBP2NLQ9P2B4 639 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 B4GALT6Q9UBX8 382 aa18.38■□□□□ 0.53
FXN-203ENST00000396366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.38■□□□□ 0.53
FXN-203ENST00000396366 A0A087WV48 116 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 A0A0U1RQS6 177 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 EME2A4GXA9 379 aaPredicted RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 TMEM202A6NGA9 273 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 HTRA2O43464 458 aaPredicted RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 CSO75390 466 aaKnown RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 MAP3K6O95382 1288 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 ITPKBP27987 946 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 SRP54P61011 504 aaKnown RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 TRAF2Q12933 501 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 DPYSL3Q14195 570 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 ACOX1Q15067 660 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 C6orf132Q5T0Z8 1188 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 PDZD3Q86UT5 571 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 PCDH19Q8TAB3 1148 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 SMIM14Q96QK8 99 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 MGME1Q9BQP7 344 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 LGR4Q9BXB1 951 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 MRPL40Q9NQ50 206 aaKnown RBP18.37■□□□□ 0.53
FXN-203ENST00000396366 SIRPGQ9P1W8 387 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 GULP1Q9UBP9 304 aa18.37■□□□□ 0.53
FXN-203ENST00000396366 CACNA1GO43497 2377 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 MFSD11O43934 449 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 USP12O75317 370 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 PROSCO94903 275 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 MPOP05164 745 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 CTSEP14091 401 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 HTR1BP28222 390 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 EIF2S3P41091 472 aaKnown RBP18.36■□□□□ 0.53
FXN-203ENST00000396366 MMP13P45452 471 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 MTM1Q13496 603 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 IHHQ14623 411 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 MARC1Q5VT66 337 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 DENND2CQ68D51 928 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 NCBP2-AS2Q69YL0 99 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.36■□□□□ 0.53
FXN-203ENST00000396366 OR1E3Q8WZA6 343 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 PDXPQ96GD0 296 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 TBATAQ96M53 351 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 WDR92Q96MX6 357 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 DEPDC7Q96QD5 511 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 NT5MQ9NPB1 228 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 KLQ9UEF7 1012 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 LOC400499M0QZD8 3231 aa18.36■□□□□ 0.53
FXN-203ENST00000396366 RASGRP1O95267 797 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 CPP00450 1065 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 CTPS1P17812 591 aa18.35■□□□□ 0.53
FXN-203ENST00000396366 PTMSP20962 102 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms