RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 UXS1Q8NBZ7 420 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 LINGO1Q96FE5 620 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 AHCYL2Q96HN2 611 aaKnown RBP17.41■□□□□ 0.38
UBFD1-201ENST00000395878 ITCHQ96J02 903 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 TMPRSS4Q9NRS4 437 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 H7C0S8 307 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 LCA5LO95447 670 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 BIKQ13323 160 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 GALNT3Q14435 633 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 COLGALT2Q8IYK4 626 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 UBASH3BQ8TF42 649 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 RNF208Q9H0X6 261 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PCDH12Q9NPG4 1184 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBFD1-201ENST00000395878 TLR5O60602 858 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PGK1P00558 417 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 CST1P01037 141 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 CD52P31358 61 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 CRHR1P34998 444 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PPTC7Q8NI37 304 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 LRRN4Q8WUT4 740 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PNPOQ9NVS9 261 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 EHD3Q9NZN3 535 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 SLC17A7Q9P2U7 560 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 MFN2O95140 757 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PIRTP0C851 137 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 SNHG28P0DPA3 235 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 PPIBP23284 216 aaKnown RBP17.41■□□□□ 0.38
UBFD1-201ENST00000395878 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.41■□□□□ 0.38
UBFD1-201ENST00000395878 KBTBD8Q8NFY9 601 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 SLC38A2Q96QD8 506 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 MECRQ9BV79 373 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 FAM105AQ9NUU6 356 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 BTBD3Q9Y2F9 522 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 TRIM17Q9Y577 477 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 LYVE1Q9Y5Y7 322 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
UBFD1-201ENST00000395878 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 GJB1P08034 283 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 LINC00032P0C843 101 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 COL6A2P12110 1019 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 SMAD3P84022 425 aaKnown RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 ISLR2Q6UXK2 745 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 CMC1Q7Z7K0 106 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 SPATA6LQ8N4H0 392 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 PHF10Q8WUB8 498 aaKnown RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 BSNDQ8WZ55 320 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 COPS8Q99627 209 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 KCNE2Q9Y6J6 123 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 MC4RP32245 332 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 ANXA8L1Q5VT79 327 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 SCIMPQ6UWF3 145 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 IKBIPQ70UQ0 350 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 RHBGQ9H310 441 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 NFKBIL1Q9UBC1 381 aaPredicted RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 PLLPQ9Y342 182 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 TRAF6Q9Y4K3 522 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 SMIM35A0A1B0GVV1 85 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 PAGE1O75459 146 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 ADRA1BP35368 520 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 MZT2BQ6NZ67 158 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 CUZD1Q86UP6 607 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 EFCAB3Q8N7B9 438 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 ZNF540Q8NDQ6 660 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 CSPG4P5Q96PW8 444 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 POLR1BQ9H9Y6 1135 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 CTSEP14091 401 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 STAT5AP42229 794 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 ITGADQ13349 1161 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 PSMD5Q16401 504 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 TEX44Q53QW1 395 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 IRAK1BP1Q5VVH5 260 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 KRT77Q7Z794 578 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 PANX1Q96RD7 426 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 HOPXQ9BPY8 73 aaPredicted RBP17.4■□□□□ 0.38
UBFD1-201ENST00000395878 COMMD3-BMI1R4GMX3 469 aa17.4■□□□□ 0.38
UBFD1-201ENST00000395878 CILPO75339 1184 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 SLC22A3O75751 556 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 TCEA2Q15560 299 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 TMEM139Q8IV31 216 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 CORO1BQ9BR76 489 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 BRD9Q9H8M2 597 aa17.39■□□□□ 0.38
UBFD1-201ENST00000395878 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.38
UBFD1-201ENST00000395878 ATP6AP2A0A1C7CYW4 349 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 CCDC189A1A4V9 331 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 ATP6AP2O75787 350 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 NR2F1P10589 423 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 SMARCB1Q12824 385 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 TRIM40Q6P9F5 258 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 COL26A1Q96A83 441 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 MAGEL2Q9UJ55 1249 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 SLC9A8Q9Y2E8 581 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 CNSTQ6PJW8 725 aa17.39■□□□□ 0.37
UBFD1-201ENST00000395878 EXOC2Q96KP1 924 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms