RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 STON1Q9Y6Q2 735 aa13.76□□□□□ -0.21
VAPB-202ENST00000395802 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 A0A0J9YYE9 177 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 K7EQS6 105 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 POLR3GO15318 223 aaPredicted RBP13.75□□□□□ -0.21
VAPB-202ENST00000395802 CDH16O75309 829 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 TRBC1P01850 177 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 XPAP23025 273 aaPredicted RBP13.75□□□□□ -0.21
VAPB-202ENST00000395802 PRKCHP24723 683 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 ATP5DP30049 168 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 NTSR1P30989 418 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 HADHAP40939 763 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 IL12RB1P42701 662 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 PRKCQQ04759 706 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 ILF2Q12905 390 aaKnown RBP13.75□□□□□ -0.21
VAPB-202ENST00000395802 PON2Q15165 354 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 QPCTQ16769 361 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 C9orf64Q5T6V5 341 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 LGSNQ5TDP6 509 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 EGFLAMQ63HQ2 1017 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 ZNF852Q6ZMS4 543 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 LMNTD2Q8IXW0 634 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 GRIN3AQ8TCU5 1115 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 CALML6Q8TD86 181 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 STYXQ8WUJ0 223 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 SCRN2Q96FV2 425 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 SHDQ96IW2 340 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 LYSMD1Q96S90 227 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 MOCS1Q9NZB8 636 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 VPS18Q9P253 973 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 PPIL1Q9Y3C6 166 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
VAPB-202ENST00000395802 SIN3BO75182 1162 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 CYP2A6P11509 494 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 LPOP22079 712 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 KIR2DL1P43626 348 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 ZP2Q05996 745 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 RASA2Q15283 850 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TSTD2Q5T7W7 516 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 KIAA0930Q6ICG6 404 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 CHST14Q8NCH0 376 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 UHMK1Q8TAS1 419 aaKnown RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 MFSD3Q96ES6 412 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 CERS2Q96G23 380 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 KLHL32Q96NJ5 620 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 ZFATQ9P243 1243 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 PKP3Q9Y446 797 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TSPAN11A1L157 253 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 GKP32189 559 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 HMGCLP35914 325 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 MSH2P43246 934 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 PRAMEP78395 509 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 MGAT5Q09328 741 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 MLF2Q15773 248 aaPredicted RBP13.74□□□□□ -0.21
VAPB-202ENST00000395802 UGP2Q16851 508 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 ZDHHC20Q5W0Z9 365 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 ERAP2Q6P179 960 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TPRG1Q6ZUI0 275 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TAOK1Q7L7X3 1001 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TDRPQ86YL5 185 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 SYNPOQ8N3V7 929 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 GPR63Q9BZJ6 419 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 ZFYVE1Q9HBF4 777 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 CACNA2D2Q9NY47 1150 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 PPM1HQ9ULR3 514 aa13.74□□□□□ -0.21
VAPB-202ENST00000395802 ZCWPW2A0A1B0GU75 182 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 STX7O15400 261 aaKnown RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 LDB2O43679 373 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 INHBAP08476 426 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 HLA-EP13747 358 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 ZNF30P17039 623 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 ITGB7P26010 798 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 SLC8A1P32418 973 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 TIE1P35590 1138 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 SEC13P55735 322 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 SFSWAPQ12872 951 aaKnown RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 FSTL4Q6MZW2 842 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 CTAGE3PQ8IX95 158 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 UBALD2Q8IYN6 164 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 STK40Q8N2I9 435 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms