RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 RING1Q06587 406 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF177Q13360 481 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 RNF219Q5W0B1 726 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CARNMT1Q8N4J0 409 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 PAF1Q8N7H5 531 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 OR6K2Q8NGY2 324 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CFAP61Q8NHU2 1237 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF461Q8TAF7 563 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 STYXQ8WUJ0 223 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 CWH43Q9H720 699 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 AGO1Q9UL18 857 aaKnown RBP17.98■□□□□ 0.47
SREBF1-204ENST00000395756 ANKRD6Q9Y2G4 727 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 VWA7Q9Y334 891 aa17.98■□□□□ 0.47
SREBF1-204ENST00000395756 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 HOXD9P28356 352 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 HADHAP40939 763 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 DEFB103AP81534 67 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 MSLNQ13421 630 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 ARHGEF6Q15052 776 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TXNDC8Q6A555 127 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TRIM68Q6AZZ1 485 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 REM2Q8IYK8 340 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TEX26Q8N6G2 289 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 PTCD2Q8WV60 388 aaKnown RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TMEM175Q9BSA9 504 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 FAM96AQ9H5X1 160 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TLE6Q9H808 572 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 ARNT2Q9HBZ2 717 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TCF7L2Q9NQB0 619 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 UBA2Q9UBT2 640 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TSR3Q9UJK0 312 aaKnown RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 MYO7AQ13402 2215 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 CCDC162PA2VCL2 907 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 ACRP10323 421 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 MBL2P11226 248 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 CRABP2P29373 138 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 RPL14P50914 215 aaKnown RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 YBEYP58557 167 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 FSCBQ5H9T9 825 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 SH2D4BQ5SQS7 431 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 PPP1R2P1Q96PQ5 205 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 MRPL46Q9H2W6 279 aaKnown RBP17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 FAM50BQ9Y247 325 aa17.97■□□□□ 0.47
SREBF1-204ENST00000395756 TPBGLP0DKB5 382 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 KCNC1P48547 511 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 CUL3Q13618 768 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 SEMA3AQ14563 771 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 SEL1L3Q68CR1 1132 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 TMEM207Q6UWW9 146 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 MYLK4Q86YV6 388 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-204ENST00000395756 SCUBE1Q8IWY4 988 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 LPCAT1Q8NF37 534 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 OR6Y1Q8NGX8 325 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 MAGEC3Q8TD91 643 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 STMN2Q93045 179 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 CCDC97Q96F63 343 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-204ENST00000395756 CATSPER2Q96P56 530 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 SPO11Q9Y5K1 396 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 GLP2RO95838 553 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 BMP1P13497 986 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 GJA1P17302 382 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 ABL2P42684 1182 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 MAPKAPK2P49137 400 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 SMAD3P84022 425 aaKnown RBP17.96■□□□□ 0.47
SREBF1-204ENST00000395756 FAM83EQ2M2I3 478 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 PPM1LQ5SGD2 360 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 EPGNQ6UW88 154 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 DNAJB7Q7Z6W7 309 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-204ENST00000395756 ARL14EPQ8N8R7 260 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-204ENST00000395756 CALML6Q8TD86 181 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 DRC3Q9H069 523 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 YIPF1Q9Y548 306 aa17.96■□□□□ 0.47
SREBF1-204ENST00000395756 LOC285095A0A1B0GVY8 99 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 H0Y626 953 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 S1PR4O95977 384 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 CDKN1CP49918 316 aaPredicted RBP17.96■□□□□ 0.46
SREBF1-204ENST00000395756 KPNA1P52294 538 aaPredicted RBP17.96■□□□□ 0.46
SREBF1-204ENST00000395756 COPAP53621 1224 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 POU4F1Q01851 419 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 BTG3Q14201 252 aaPredicted RBP17.96■□□□□ 0.46
SREBF1-204ENST00000395756 DBN1Q16643 649 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 C1orf146Q5VVC0 180 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 ULK2Q8IYT8 1036 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 LSMEM2Q8N112 164 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 SNX31Q8N9S9 440 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 IGSF5Q9NSI5 407 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 DNAJC28Q9NX36 388 aa17.96■□□□□ 0.46
SREBF1-204ENST00000395756 AIM2O14862 343 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 CD3EAPO15446 510 aaKnown RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 GPR39O43194 453 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 C1RP00736 705 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 LSM12Q3MHD2 195 aaKnown RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 SLC30A9Q6PML9 568 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 FRMD7Q6ZUT3 714 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 OR4K2Q8NGD2 314 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 LENG8Q96PV6 779 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms