RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 PRMT8Q9NR22 394 aaPredicted RBP8.16□□□□□ -1.1
LIMS1-203ENST00000393310 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 A0A1B0GVT2 93 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 STX16-NPEPL1H3BU86 382 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 SLC31A1O15431 190 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 TSPAN3O60637 253 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 SLITRK3O94933 977 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 PAMP19021 973 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 ITGALP20701 1170 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 OTUD4Q01804 1114 aaKnown RBP8.16□□□□□ -1.1
LIMS1-203ENST00000393310 STK4Q13043 487 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 KIAA1161Q6NSJ0 714 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 C16orf46Q6P387 395 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 SV2AQ7L0J3 742 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 RFKQ969G6 155 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 WBP1Q96G27 269 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 NSMCE3Q96MG7 304 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 DPEP2Q9H4A9 486 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 POLR1BQ9H9Y6 1135 aa8.16□□□□□ -1.1
LIMS1-203ENST00000393310 CHORDC1Q9UHD1 332 aaPredicted RBP8.16□□□□□ -1.1
LIMS1-203ENST00000393310 KNTC1P50748 2209 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 ZNF254O75437 659 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 HBQ1P09105 142 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CORO1AP31146 461 aaKnown RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 SDC4P31431 198 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 USP46P62068 366 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CD83Q01151 205 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 LRRC36Q1X8D7 754 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 FAM180BQ6P0A1 224 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CNSTQ6PJW8 725 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CEACAM20Q6UY09 585 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 EFL1Q7Z2Z2 1120 aaKnown RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 RTN4RL1Q86UN2 441 aaPredicted RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 SRRM1Q8IYB3 904 aaKnown RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 LGI2Q8N0V4 545 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CLIP3Q96DZ5 547 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 PANX2Q96RD6 677 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 HERPUD2Q9BSE4 406 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 EPS8L2Q9H6S3 715 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 ZNF446Q9NWS9 450 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 SOHLH2Q9NX45 425 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 PISDQ9UG56 409 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 POLHQ9Y253 713 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 C15orf41Q9Y2V0 281 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 OR5K4A6NMS3 321 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 DUX1O43812 170 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 TULP3O75386 442 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CIB2O75838 187 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 DCTN3O75935 186 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 HSD3B2P26439 372 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 GNALP38405 381 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 MSLNQ13421 630 aaPredicted RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 PCSK7Q16549 785 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 UPP1Q16831 310 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 TRIM16LQ309B1 348 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 RNF19BQ6ZMZ0 732 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 HORMAD1Q86X24 394 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 DENND1CQ8IV53 801 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 C7orf57Q8NEG2 295 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 RLN3Q8WXF3 142 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 ZC3H10Q96K80 434 aaKnown RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 TRIM15Q9C019 465 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
LIMS1-203ENST00000393310 KLQ9UEF7 1012 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 SDK1Q7Z5N4 2213 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 ARAP2Q8WZ64 1704 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 CDH23Q9H251 3354 aa8.15□□□□□ -1.1
LIMS1-203ENST00000393310 KRBA1A5PL33 1030 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 AKAP10O43572 662 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 DYRK3O43781 588 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CLDN11O75508 207 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ANP32DO95626 131 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 OR4Q2P0C623 313 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CHRNB1P11230 501 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 TUBP50607 506 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 KRT81Q14533 505 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 MORF4L2Q15014 288 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 TMED2Q15363 201 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ANKS6Q68DC2 871 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 HMBOX1Q6NT76 420 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CNGA4Q8IV77 575 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CHERPQ8IWX8 916 aaKnown RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 RHOT2Q8IXI1 618 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 FBXL13Q8NEE6 735 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 KLHL29Q96CT2 875 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CDH19Q9H159 772 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 FANCLQ9NW38 375 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 HCFC1R1Q9NWW0 138 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 HSPBP1Q9NZL4 362 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ANAPC5Q9UJX4 755 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 VCANP13611 3396 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 MYH1P12882 1939 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 C2orf74A8MZ97 194 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms