RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 RPL26L1Q9UNX3 145 aaKnown RBP17.12■□□□□ 0.33
ERCC2-202ENST00000391942 ITM2BQ9Y287 266 aa17.12■□□□□ 0.33
ERCC2-202ENST00000391942 A0A1W2PQ67 120 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 NPIPB15A6NHN6 443 aaPredicted RBP17.11■□□□□ 0.33
ERCC2-202ENST00000391942 ALDH1A2O94788 518 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 CXCL12P48061 93 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 CLCN5P51795 746 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 DHX9Q08211 1270 aaKnown RBP17.11■□□□□ 0.33
ERCC2-202ENST00000391942 TTC31Q49AM3 519 aaPredicted RBP17.11■□□□□ 0.33
ERCC2-202ENST00000391942 CCDC38Q502W7 563 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 PIP5KL1Q5T9C9 394 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 USP45Q70EL2 814 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 PDIK1LQ8N165 341 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 AGGF1Q8N302 714 aaeCLIP17.11■□□□□ 0.33
ERCC2-202ENST00000391942 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 FMO2Q99518 471 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 HDAC8Q9BY41 377 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 TPSD1Q9BZJ3 242 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 MTRF1LQ9UGC7 380 aaKnown RBP17.11■□□□□ 0.33
ERCC2-202ENST00000391942 GGT7Q9UJ14 662 aa17.11■□□□□ 0.33
ERCC2-202ENST00000391942 TTC28Q96AY4 2481 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 CCDC78A2IDD5 438 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 MLNP12872 115 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 MAGEA3P43357 314 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 MAGEA9P43362 315 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 PDIA2Q13087 525 aaKnown RBP17.1■□□□□ 0.33
ERCC2-202ENST00000391942 AGBL4Q5VU57 503 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 CASC4Q6P4E1 433 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 CCNI2Q6ZMN8 369 aaPredicted RBP17.1■□□□□ 0.33
ERCC2-202ENST00000391942 TSPAN33Q86UF1 283 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 RUBCNQ92622 972 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 SCRN2Q96FV2 425 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 SAYSD1Q9NPB0 183 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 BFARQ9NZS9 450 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 B4GALT6Q9UBX8 382 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 EBF1Q9UH73 591 aa17.1■□□□□ 0.33
ERCC2-202ENST00000391942 FAM86C2PA6NEL3 165 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 AURKAO14965 403 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 SPINT1O43278 529 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 BUD23O43709 281 aaKnown RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 PPFIA2O75334 1257 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 APBB3O95704 486 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 FAM153BP0C7A2 387 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 TNFRSF8P28908 595 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 NPY2RP49146 381 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 CCR3P51677 355 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 FASTKD3Q14CZ7 662 aaKnown RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 FAM153CQ494X1 144 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 DNAJC21Q5F1R6 531 aaKnown RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 ERAP2Q6P179 960 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 WDR93Q6P2C0 686 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 CENPUQ71F23 418 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 LYSMD3Q7Z3D4 306 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 GLT6D1Q7Z4J2 308 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 FRMD8Q9BZ67 464 aaPredicted RBP17.09■□□□□ 0.33
ERCC2-202ENST00000391942 FAM129AQ9BZQ8 928 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 PPIL1Q9Y3C6 166 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 ZNF711Q9Y462 761 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 KCTD3Q9Y597 815 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 ARL5AQ9Y689 179 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 MAD1L1Q9Y6D9 718 aa17.09■□□□□ 0.33
ERCC2-202ENST00000391942 C1orf232A0A0U1RR37 186 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 SDR42E2A6NKP2 422 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 AP3B1O00203 1094 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 TNFRSF10AO00220 468 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 NEMP1O14524 444 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 CLDN7O95471 211 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 LHCGRP22888 699 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 TPMTP51580 245 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 TSSK4Q6SA08 328 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 CRTC1Q6UUV9 634 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 IGDCC3Q8IVU1 814 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 ZBED8Q8IZ13 594 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 OR14C36Q8NHC7 312 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 SIGLEC10Q96LC7 697 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
ERCC2-202ENST00000391942 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.32
ERCC2-202ENST00000391942 WRAP53Q9BUR4 548 aaKnown RBP17.08■□□□□ 0.32
ERCC2-202ENST00000391942 GPR63Q9BZJ6 419 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 MAGEE1Q9HCI5 957 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 CYP8B1Q9UNU6 501 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 CHMP2BQ9UQN3 213 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 NCKAP1Q9Y2A7 1128 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 MUC3AQ02505 3323 aa17.08■□□□□ 0.32
ERCC2-202ENST00000391942 PRR23AA6NEV1 266 aa17.07■□□□□ 0.32
ERCC2-202ENST00000391942 K7ESF4 209 aa17.07■□□□□ 0.32
ERCC2-202ENST00000391942 CYP2A6P11509 494 aaPredicted RBP17.07■□□□□ 0.32
ERCC2-202ENST00000391942 VIPR1P32241 457 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms