RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 CHORDC1Q9UHD1 332 aaPredicted RBP3.04□□□□□ -1.92
TRAJ40-201ENST00000390497 ZHX1Q9UKY1 873 aaPredicted RBP3.04□□□□□ -1.92
TRAJ40-201ENST00000390497 ERVK-11Q9UQG0 969 aa3.04□□□□□ -1.92
TRAJ40-201ENST00000390497 COX11Q9Y6N1 276 aa3.04□□□□□ -1.92
TRAJ40-201ENST00000390497 A3GALT2U3KPV4 340 aa3.04□□□□□ -1.92
TRAJ40-201ENST00000390497 NCANO14594 1321 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 A0A0U1RQF3 1178 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 LRRC72A6NJI9 287 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 FAM90A8PA6NJQ4 464 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 GLOD5A6NK44 160 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 HSPB2A8KAH6 182 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CTDSP2O14595 271 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TP73O15350 636 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ZC3H11AO75152 810 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CNOT3O75175 753 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ATP2C2O75185 946 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ENTPD3O75355 529 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 NKX2-2O95096 273 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 IFNA2P01563 188 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TPOP07202 933 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 FAM90A13PP0C7W8 464 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 FAM90A24PP0C7X0 464 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SELLP14151 372 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ITGAXP20702 1163 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 RRM1P23921 792 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 AVPR1AP37288 418 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PRCPP42785 496 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SLC15A1P46059 708 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 RASSF2P50749 326 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 HSD17B4P51659 736 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CLCN5P51795 746 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PMS2P54278 862 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CDH12P55289 794 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ZXDAP98168 799 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ACSM2AQ08AH3 577 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 GRIK2Q13002 908 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CDC16Q13042 620 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TNFAIP1Q13829 316 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PCLAFQ15004 111 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TRIP6Q15654 476 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 HSPB2Q16082 182 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TMEM266Q2M3C6 531 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SMTNL2Q2TAL5 461 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SGO1Q5FBB7 561 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CXorf66Q5JRM2 361 aaPredicted RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CEP78Q5JTW2 689 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 Q5PR19 223 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 LRCH2Q5VUJ6 765 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PAPD7Q5XG87 772 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 KRT79Q5XKE5 535 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ACSM2BQ68CK6 577 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TRILQ7L0X0 811 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ANKRD13BQ86YJ7 626 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SCML4Q8N228 414 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 LRRC57Q8N9N7 239 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 MCUQ8NE86 351 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 AGBL3Q8NEM8 1001 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PRSS3P2Q8NHM4 247 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 HUS1BQ8NHY5 278 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CEP76Q8TAP6 659 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TMEM174Q8WUU8 243 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 NSMCE1Q8WV22 266 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TMEM18Q96B42 140 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SLC22A18Q96BI1 424 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PABPC5Q96DU9 382 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 FIZ1Q96SL8 496 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SH3GL2Q99962 352 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 TRMOQ9BU70 441 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 MMTAG2Q9BU76 263 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 KIFC3Q9BVG8 833 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 NUF2Q9BZD4 464 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ZCCHC17Q9NP64 241 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 ARHGEF38Q9NXL2 777 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 CTNNAL1Q9UBT7 734 aa3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PLEKHB1Q9UF11 243 aaPredicted RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 PPIEQ9UNP9 301 aaKnown RBP3.03□□□□□ -1.92
TRAJ40-201ENST00000390497 SMIM35A0A1B0GVV1 85 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 A0A1W2PRQ8 180 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 FAM170AA1A519 330 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 OR2A25A4D2G3 310 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 TMEM202A6NGA9 273 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 MANSC4A6NHS7 340 aaPredicted RBP3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 SNAP23O00161 211 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 MASP2O00187 686 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 MDM4O15151 490 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 KLK8O60259 260 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 MITFO75030 526 aaPredicted RBP3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 TBCAO75347 108 aaKnown RBP3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 GJB3O75712 270 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 BCAR3O75815 825 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 NUDT3O95989 172 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 HSP90AB1P08238 724 aaKnown RBP3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 PON1P27169 355 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 KCNJ4P48050 445 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 NRIP1P48552 1158 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 ALDH7A1P49419 539 aaKnown RBP3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 CXCR3P49682 368 aa3.02□□□□□ -1.93
TRAJ40-201ENST00000390497 LIG4P49917 911 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms