RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GRAMD1AQ96CP6 724 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 ERP27Q96DN0 273 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 PAWRQ96IZ0 340 aaKnown RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 C12orf42Q96LP6 360 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 NLRP4Q96MN2 994 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 TMEM237Q96Q45 408 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 TWNKQ96RR1 684 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 CPXM1Q96SM3 734 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 CPPED1Q9BRF8 314 aaPredicted RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 WDR83Q9BRX9 315 aaKnown RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 SMYD3Q9H7B4 428 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 SYNCQ9H7C4 482 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 PCDH9Q9HC56 1237 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 GEMIN8Q9NWZ8 242 aaKnown RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 HOXC10Q9NYD6 342 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 SLC17A7Q9P2U7 560 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 PSMC3IPQ9P2W1 217 aaPredicted RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 HMGXB4Q9UGU5 601 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 XPO7Q9UIA9 1087 aaKnown RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
SMC6-202ENST00000381272 CHMP2BQ9UQN3 213 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 CHKBQ9Y259 395 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 CEP83Q9Y592 693 aa3.83□□□□□ -1.8
SMC6-202ENST00000381272 TRIP11Q15643 1979 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PAPPA2Q9BXP8 1791 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 INO80B-WBP1J3KQ70 363 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 TPD52L2O43399 206 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 TYROBPO43914 113 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PRAMEF4O60810 478 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 AVILO75366 819 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 GRAP2O75791 330 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 FAM155BO75949 473 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 TMEM63AO94886 807 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 UNC5CO95185 931 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CBX6O95503 412 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 TRUB2O95900 331 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 PGK2P07205 417 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ADH4P08319 380 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 KRT7P08729 469 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 T-ENOLP0DO92 83 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CXCL8P10145 99 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ALADP13716 330 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CCNB1P14635 433 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CPEP16870 476 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 HK1P19367 917 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ENPP1P22413 925 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CCND1P24385 295 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ADRA1DP25100 572 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 RPS12P25398 132 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 MIPP30301 263 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CDC25CP30307 473 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CDH5P33151 784 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 PTPN7P35236 360 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ELK3P41970 407 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CLCN3P51790 818 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 EFNA5P52803 228 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 AP3M2P53677 418 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CLNS1AP54105 237 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 RAD23BP54727 409 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 EIF3EP60228 445 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 BASP1P80723 227 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 TAP1Q03518 808 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 MRPL49Q13405 166 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 DPYSL3Q14195 570 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PDK4Q16654 411 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 HADHQ16836 314 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 C15orf59Q2T9L4 293 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 HSDL1Q3SXM5 330 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 TAF1BQ53T94 588 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 C19orf54Q5BKX5 351 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 RABL3Q5HYI8 236 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ATF7IP2Q5U623 682 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 FNDC7Q5VTL7 733 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 C1QL3Q5VWW1 255 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 NAIF1Q69YI7 327 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 DARS2Q6PI48 645 aaKnown RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 GADL1Q6ZQY3 521 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 BBS12Q6ZW61 710 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PCGF5Q86SE9 256 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 LRRC6Q86X45 466 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 XYLT1Q86Y38 959 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 NIPA2Q8N8Q9 360 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 NAT8LQ8N9F0 302 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 SLC4A11Q8NBS3 891 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 GLB1L3Q8NCI6 653 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 TCP10LQ8TDR4 215 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 NSMCE1Q8WV22 266 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 DCAKDQ8WVC6 231 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 C10orf82Q8WW14 230 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 RAX2Q96IS3 184 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ANKRD36BP1Q96IX9 119 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PEBP4Q96S96 227 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PAFAH2Q99487 392 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 CALN1Q9BXU9 219 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 INO80BQ9C086 356 aaPredicted RBP3.82□□□□□ -1.8
SMC6-202ENST00000381272 ZNF518BQ9C0D4 1074 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 ELOVL4Q9GZR5 314 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 PRDM12Q9H4Q4 367 aa3.82□□□□□ -1.8
SMC6-202ENST00000381272 MINDY3Q9H8M7 445 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms