RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 RAD51Q06609 339 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 NR1D2Q14995 579 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 ANKS6Q68DC2 871 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 RWDD4Q6NW29 188 aaKnown RBP17.43■□□□□ 0.38
HMGN1-203ENST00000380748 ZDHHC17Q8IUH5 632 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 KIAA1524Q8TCG1 905 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CRACR2AQ9BSW2 395 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CYP4F12Q9HCS2 524 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 IGSF5Q9NSI5 407 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 OCIAD1Q9NX40 245 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 PILRAQ9UKJ1 303 aa17.43■□□□□ 0.38
HMGN1-203ENST00000380748 CACNB4O00305 520 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 BUB1O43683 1085 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 IGSF6O95976 241 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 PRKCGP05129 697 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 RNF224P0DH78 156 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 CSF2RBP32927 897 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 CSTF2P33240 577 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 MAPKAPK2P49137 400 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 TRA2AQ13595 282 aaKnown RBP eCLIP17.42■□□□□ 0.388e-24■■□□□ 11.7
HMGN1-203ENST00000380748 AGERQ15109 404 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 CLPPQ16740 277 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 RAB6CQ53S08 254 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 MANEALQ5VSG8 457 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 NKAIN2Q5VXU1 208 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 ISM2Q6H9L7 571 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 TRIM65Q6PJ69 517 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 BNIPLQ7Z465 357 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 C17orf82Q86X59 251 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 FAM129CQ86XR2 697 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 SHC3Q92529 594 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 KIAA1143Q96AT1 154 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 DHTKD1Q96HY7 919 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 CFAP57Q96MR6 1250 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 ASPSCR1Q9BZE9 553 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 SCAND2PQ9GZW5 306 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 RAB6CQ9H0N0 254 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 MAGEH1Q9H213 219 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 TMEM9Q9P0T7 183 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 MOSPD1Q9UJG1 213 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 NEU3Q9UQ49 428 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 MFHAS1Q9Y4C4 1052 aa17.42■□□□□ 0.38
HMGN1-203ENST00000380748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGN1-203ENST00000380748 EFCAB7A8K855 629 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 KDELR3O43731 214 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 RAMP2O60895 175 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 FGF1P05230 155 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 THRAP10827 490 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 RHOQP17081 205 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 GNLYP22749 145 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 KRT9P35527 623 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 MMP12P39900 470 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 SUOXP51687 545 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 RHOAP61586 193 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 STIM1Q13586 685 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 UGP2Q16851 508 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 DCAF12Q5T6F0 453 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 NRSN1Q8IZ57 195 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 OR4D9Q8NGE8 314 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 ZDHHC1Q8WTX9 485 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 LGR4Q9BXB1 951 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 KLC2Q9H0B6 622 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 SUDS3Q9H7L9 328 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-203ENST00000380748 TMEM248Q9NWD8 314 aa17.41■□□□□ 0.38
HMGN1-203ENST00000380748 TSPAN11A1L157 253 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 A1L4Q6 167 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 B4E171 279 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FAM72CH0Y354 149 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 TNFRSF10CO14798 259 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SMC2O95347 1197 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 ECEL1O95672 775 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SLC9A1P19634 815 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 TSPAN7P41732 249 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SEPT6Q14141 434 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FHL5Q5TD97 284 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FAM72AQ5TYM5 149 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 CAPRIN2Q6IMN6 1127 aaKnown RBP17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FAM72DQ6L9T8 149 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 C16orf46Q6P387 395 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 TIPARPQ7Z3E1 657 aaKnown RBP17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SLC47A2Q86VL8 602 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FAM72BQ86X60 149 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 ZNF354CQ86Y25 554 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 NRROSQ86YC3 692 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 NLGN4XQ8N0W4 816 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 FMR1NBQ8N0W7 255 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-203ENST00000380748 BMPERQ8N8U9 685 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 TEX19Q8NA77 164 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 NLGN4YQ8NFZ3 816 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SSC4DQ8WTU2 575 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 STARD8Q92502 1023 aa17.4■□□□□ 0.38
HMGN1-203ENST00000380748 SNX21Q969T3 373 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms