RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 SUV39H2Q9H5I1 410 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 RBM22Q9NW64 420 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■■□□□ 13.5
HMGN1-202ENST00000380747 DKK3Q9UBP4 350 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 AMFRQ9UKV5 643 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TPX2Q9ULW0 747 aaKnown RBP9.32□□□□□ -0.92
HMGN1-202ENST00000380747 DMTF1Q9Y222 760 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 PCDHA3Q9Y5H8 950 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 CHD5Q8TDI0 1954 aa9.32□□□□□ -0.92
HMGN1-202ENST00000380747 TNRC6BQ9UPQ9 1833 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 NUP205Q92621 2012 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ACACAQ13085 2346 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 MAST4O15021 2626 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 hCG_1818297A0A087WSY0 165 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CCDC66A2RUB6 948 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 C10orf142B7Z368 130 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PRAMEF26H0Y7S4 382 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 WNT9AO14904 365 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PPP1R12AO14974 1030 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 LATO43561 262 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 TSPAN6O43657 245 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 FTCDO95954 541 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CAPNS1P04632 268 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PRKCGP05129 697 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CCNB1P14635 433 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CTNNA2P26232 953 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 AKT2P31751 481 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 NUDT1P36639 197 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CETN2P41208 172 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 GRIA4P48058 902 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 RWDD2BP57060 319 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 RACK1P63244 317 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SEMG2Q02383 582 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SGCGQ13326 291 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 HNRNPDQ14103 355 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 TAZQ16635 292 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 TFDP3Q5H9I0 405 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CCDC181Q5TID7 509 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 KIAA1161Q6NSJ0 714 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 BRAT1Q6PJG6 821 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PEX26Q7Z412 305 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ZSWIM9Q86XI8 627 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SYCE1Q8N0S2 351 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 MINDY1Q8N5J2 469 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 TEX26Q8N6G2 289 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 LRRC57Q8N9N7 239 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PLPP7Q8NBV4 271 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 HCAR2Q8TDS4 363 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CXorf40AQ8TE69 158 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PDCD6IPQ8WUM4 868 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ANP32BQ92688 251 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 HAUS1Q96CS2 278 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 HDAC11Q96DB2 347 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SEMA3CQ99985 751 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 MGME1Q9BQP7 344 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 TSGA10Q9BZW7 698 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ZDHHC5Q9C0B5 715 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 NOD2Q9HC29 1040 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 FZD3Q9NPG1 666 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SEPT10Q9P0V9 454 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SAE1Q9UBE0 346 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 GGT7Q9UJ14 662 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
HMGN1-202ENST00000380747 CA5BQ9Y2D0 317 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 ANKRD6Q9Y2G4 727 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 PCDHGC4Q9Y5F7 938 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 SNX11Q9Y5W9 270 aa9.31□□□□□ -0.92
HMGN1-202ENST00000380747 APC2O95996 2303 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 A0A1W2PR77 199 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 TSPAN11A1L157 253 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 IGLON5A6NGN9 336 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 KCNK1O00180 336 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 KCNK3O14649 394 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 VILLO15195 856 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 SPINT1O43278 529 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 KRT86O43790 486 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 MMP20O60882 483 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 OPHN1O60890 802 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 CPP00450 1065 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 JCHAINP01591 159 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 WNT1P04628 370 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
HMGN1-202ENST00000380747 CCDC175P0C221 793 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 PECAM1P16284 738 aaPredicted RBP9.3□□□□□ -0.92
HMGN1-202ENST00000380747 CR2P20023 1033 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 TGM2P21980 687 aa9.3□□□□□ -0.92
HMGN1-202ENST00000380747 HNRNPA2B1P22626 353 aaKnown RBP9.3□□□□□ -0.92
HMGN1-202ENST00000380747 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
HMGN1-202ENST00000380747 CD38P28907 300 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms