RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 GOLGA6CA6NDK9 693 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 GOLGA6BA6NDN3 693 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 PRR23AA6NEV1 266 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 C10orf142B7Z368 130 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 NEMP1O14524 444 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 MAP3K13O43283 966 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 LILRB5O75023 590 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 SUN1O94901 812 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 PIRTP0C851 137 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 GOLGA6DP0CG33 693 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 IVDP26440 423 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 ADCY8P40145 1251 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 GRIA4P48058 902 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 RPL6Q02878 288 aaKnown RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 PRRX2Q99811 253 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 GOLGA6AQ9NYA3 693 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 PLXND1Q9Y4D7 1925 aa12.71□□□□□ -0.37
SMN2-203ENST00000380743 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.37
SMN2-203ENST00000380743 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CAPN8A6NHC0 703 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 LRRC72A6NJI9 287 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PSMD3O43242 534 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 TSPAN6O43657 245 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 NDUFS2O75306 463 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PCDH8O95206 1070 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 HLA-DPA1P20036 260 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 LHCGRP22888 699 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CNR2P34972 360 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 GRIA1P42261 906 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.38
SMN2-203ENST00000380743 LMAN1P49257 510 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PPP2CBP62714 309 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PPP2CAP67775 309 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 ELP6Q0PNE2 266 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 RALGDSQ12967 914 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 KCNJ11Q14654 390 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 SEL1L3Q68CR1 1132 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 USP45Q70EL2 814 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 DPPA4Q7L190 304 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CEP112Q8N8E3 955 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 CPT1BQ92523 772 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PREBQ9HCU5 417 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 PIH1D1Q9NWS0 290 aaKnown RBP12.71□□□□□ -0.38
SMN2-203ENST00000380743 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.38
SMN2-203ENST00000380743 SPO11Q9Y5K1 396 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 R4GN57 208 aa12.71□□□□□ -0.38
SMN2-203ENST00000380743 A0A1W2PQU0 124 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 MMP20O60882 483 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 RNGTTO60942 597 aaKnown RBP12.7□□□□□ -0.38
SMN2-203ENST00000380743 FGF1P05230 155 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 VIPR1P32241 457 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 MAGEA6P43360 314 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 LIG3P49916 1009 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 MSLNQ13421 630 aaPredicted RBP12.7□□□□□ -0.38
SMN2-203ENST00000380743 CDKN3Q16667 212 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 NAPEPLDQ6IQ20 393 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 CRTC1Q6UUV9 634 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 OR52K1Q8NGK4 314 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 LRRC1Q9BTT6 524 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 TRIM31Q9BZY9 425 aa12.7□□□□□ -0.38
SMN2-203ENST00000380743 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
SMN2-203ENST00000380743 EIF2B3Q9NR50 452 aaKnown RBP12.7□□□□□ -0.38
SMN2-203ENST00000380743 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
SMN2-203ENST00000380743 AURKAO14965 403 aa12.69□□□□□ -0.38
SMN2-203ENST00000380743 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
SMN2-203ENST00000380743 FSBPO95073 299 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms