RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 STRADAQ7RTN6 431 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 ERO1BQ86YB8 467 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CATSPER1Q8NEC5 780 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PDCD6IPQ8WUM4 868 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 HEXDCQ8WVB3 486 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 HIPK3Q9H422 1215 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 MKS1Q9NXB0 559 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 LRRC14BA6NHZ5 514 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 BAIAP3O94812 1187 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 DDHD2O94830 711 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 MYL3P08590 195 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CARTPTQ16568 116 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 KIF19Q2TAC6 998 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 BTLAQ7Z6A9 289 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 MFSD6LQ8IWD5 586 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 TMCO5AQ8N6Q1 288 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 TXNDC5Q8NBS9 432 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PABPC5Q96DU9 382 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PCED1BQ96HM7 432 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 NPY6RQ99463 290 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 EFCAB1Q9HAE3 211 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CXorf21Q9HAI6 301 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 DAPK2Q9UIK4 370 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SORCS3Q9UPU3 1222 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 RAP2CQ9Y3L5 183 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 AKAP10O43572 662 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 POMCP01189 267 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 GNAO1P09471 354 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SBK3P0C264 359 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 MLNP12872 115 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 STMN1P16949 149 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CHRM3P20309 590 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 NKX2-5P52952 324 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 ANO4Q32M45 955 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 GALNT18Q6P9A2 607 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 ZC3HC1Q86WB0 502 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CENPLQ8N0S6 344 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SIX5Q8N196 739 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 OR52K2Q8NGK3 314 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CRTAC1Q9NQ79 661 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 ASB14A6NK59 587 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 HACD1B0YJ81 288 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 TIMM44O43615 452 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 HMBSP08397 361 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 ACADSBP45954 432 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 HSPA13P48723 471 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 LIPMQ5VYY2 423 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 C16orf89Q6UX73 402 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CADM3Q8N126 398 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 GPR152Q8TDT2 470 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SH3RF2Q8TEC5 729 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 NAT9Q9BTE0 207 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 VTA1Q9NP79 307 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SQORQ9Y6N5 450 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 F8W810 466 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 DCLK1O15075 740 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CYP2B6P20813 491 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC1A2P43004 574 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CLCNKBP51801 687 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CREB5Q02930 508 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CHST15Q7LFX5 561 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 PIM3Q86V86 326 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 UNC93AQ86WB7 457 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 ZC3H7AQ8IWR0 971 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SCN4BQ8IWT1 228 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 LSMEM2Q8N112 164 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 TMEM102Q8N9M5 508 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 ESAMQ96AP7 390 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CGREF1Q99674 301 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SMOQ99835 787 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 SOX17Q9H6I2 414 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 ALG9Q9H6U8 611 aa12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 CLK4Q9HAZ1 481 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRPF40B-202ENST00000380281 MKI67P46013 3256 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 A0A0G2JLL6 359 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms