RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NDNQ99608 321 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 MTIF3Q9H2K0 278 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 KIAA1522Q9P206 1035 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CPSF2Q9P2I0 782 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CAPN7Q9Y6W3 813 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CCDC162PA2VCL2 907 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ANKRD66B4E2M5 251 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ITM2AO43736 263 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 DNAJC6O75061 913 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 FGF19O95750 216 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 GLP2RO95838 553 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 RALBP11234 206 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 COL6A2P12110 1019 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 SLC8A1P32418 973 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CD70P32970 193 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 BNIP1Q12981 228 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 SLC5A9Q2M3M2 681 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ATXN7L2Q5T6C5 722 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 RETSATQ6NUM9 610 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 LCA5Q86VQ0 697 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 CRLF3Q8IUI8 442 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ARID3BQ8IVW6 561 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 TMEM151AQ8N4L1 468 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 RIN3Q8TB24 985 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ACDQ96AP0 544 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 TSNARE1Q96NA8 513 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 ADGRE3Q9BY15 652 aa19.93■□□□□ 0.78
PDLIM5-205ENST00000380180 GRXCR1A8MXD5 290 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 CD3EAPO15446 510 aaKnown RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 SMAD6O43541 496 aaKnown RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 CLASP2O75122 1294 aaKnown RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 LYPLA1O75608 230 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 SERPINE1P05121 402 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 DDX6P26196 483 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 SLC1A6P48664 564 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 SLC12A2P55011 1212 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 ITGA9Q13797 1035 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 TAF1AQ15573 450 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 GLT6D1Q7Z4J2 308 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 MICALL1Q8N3F8 863 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 ERP27Q96DN0 273 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 CDKN2AIPNLQ96HQ2 116 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 TMEM120AQ9BXJ8 343 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 NLE1Q9NVX2 485 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 CYBBP04839 570 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 KITP10721 976 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 MYL2P10916 166 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 GRK2P25098 689 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 GLRBP48167 497 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 CLCN5P51795 746 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 ZNF140P52738 457 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 ARHGAP15Q53QZ3 475 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 GPR150Q8NGU9 434 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 OR4L1Q8NH43 312 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 USP13Q92995 863 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 NXNL1Q96CM4 212 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 OLFM1Q99784 485 aa19.92■□□□□ 0.78
PDLIM5-205ENST00000380180 LAMA3Q16787 3333 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 PER2O15055 1255 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 APOA4P06727 396 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 HOXA9P31269 272 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 NTHL1P78549 312 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 DLG1Q12959 904 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 PLEKHG6Q3KR16 790 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 ZNF697Q5TEC3 545 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 ATG14Q6ZNE5 492 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 FSTL5Q8N475 847 aaPredicted RBP19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 SPATA6LQ8N4H0 392 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 OR4K2Q8NGD2 314 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 OR6Y1Q8NGX8 325 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 SCYL1Q96KG9 808 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 GPR78Q96P69 363 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 TM6SF2Q9BZW4 377 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 TDP1Q9NUW8 608 aa19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 MARCOQ9UEW3 520 aaPredicted RBP19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 INTS6Q9UL03 887 aaKnown RBP19.91■□□□□ 0.78
PDLIM5-205ENST00000380180 C2orf81A6NN90 581 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 TK2O00142 265 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 KLHL2O95198 593 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 RB1P06400 928 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 SBK3P0C264 359 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 ABL2P42684 1182 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 SEMA3AQ14563 771 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 PTPRRQ15256 657 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 RALGPS1Q5JS13 557 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 CCDC91Q7Z6B0 441 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 MTDHQ86UE4 582 aaKnown RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 LBHD1Q9BQE6 289 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 HEY2Q9UBP5 337 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 CRYL1Q9Y2S2 319 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 VWA7Q9Y334 891 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 NUMBLQ9Y6R0 609 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 PRRC2BQ5JSZ5 2229 aaKnown RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 A0A087X1B8 175 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 ARRB2P32121 409 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 HECTD2Q5U5R9 776 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 FAM109BQ6ICB4 259 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 MRNIPQ6NTE8 343 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms