RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 OR2T3Q8NH03 318 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PHF10Q8WUB8 498 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 LHX5Q9H2C1 402 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TLR8Q9NR97 1041 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ABCC13Q9NSE7 274 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TBKBP1A7MCY6 615 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 VPS4BO75351 444 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 RGS20O76081 388 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ANGPTL1O95841 491 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CNPP09543 421 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TCF4P15884 667 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 UGT1A6P19224 532 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 UGT1A1P22309 533 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 UGT1A4P22310 534 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 S100A1P23297 94 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 WEE1P30291 646 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 UGT1A3P35503 534 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 UGT1A5P35504 534 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 MAGEA10P43363 369 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 RPS9P46781 194 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 MERTKQ12866 999 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 EPS8Q12929 822 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 BNIP2Q12982 314 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CAPSQ13938 189 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 DPYSQ14117 519 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PYDC2Q56P42 97 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 GPR158Q5T848 1215 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PNPT1Q8TCS8 783 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 WNT8BQ93098 351 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PPM1MQ96MI6 270 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PRKD2Q9BZL6 878 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 C17orf102A2RUQ5 167 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PSIP1O75475 530 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SORBS2O94875 1100 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TSPAN19P0C672 248 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CKMT2P17540 419 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ALDH4A1P30038 563 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 RFX3P48380 749 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 MADCAM1Q13477 382 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CPSF6Q16630 551 aaKnown RBP eCLIP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 HSDL1Q3SXM5 330 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 REP15Q6BDI9 236 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ZNF549Q6P9A3 640 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 BBS12Q6ZW61 710 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CYP4Z1Q86W10 505 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PTGR2Q8N8N7 351 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 DRAXINQ8NBI3 349 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 AKT1S1Q96B36 256 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 RBM4BQ9BQ04 359 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 RBM4Q9BWF3 364 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 IDI2Q9BXS1 227 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 GLIS2Q9BZE0 524 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TMEM134Q9H6X4 195 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ARL15Q9NXU5 204 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SLC17A6Q9P2U8 582 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ZDHHC2Q9UIJ5 367 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SLC22A3O75751 556 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 F7P08709 466 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 POLD2P49005 469 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ATXN1P54253 815 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 OXCT1P55809 520 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 GRM3Q14832 879 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 STARD3Q14849 445 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 VPS72Q15906 364 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 METTL21CQ5VZV1 264 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TMEM214Q6NUQ4 689 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 EPHX4Q8IUS5 362 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SYT12Q8IV01 421 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 NODALQ96S42 347 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TCF12Q99081 682 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 FAM126AQ9BYI3 521 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SPATC1LQ9H0A9 340 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ASB8Q9H765 288 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 DNAJC28Q9NX36 388 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 LEF1Q9UJU2 399 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ZNF222Q9UK12 451 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 MRPS7Q9Y2R9 242 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 PRKAB1Q9Y478 270 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 SNCAIPQ9Y6H5 919 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 NFAT5O94916 1531 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ZNF7P17097 686 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 WARSP23381 471 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 DNAJB2P25686 324 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 HOXD13P35453 343 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ALDH7A1P49419 539 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 KLF1Q13351 362 aaPredicted RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 MOGSQ13724 837 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TRIM71Q2Q1W2 868 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ANKRD23Q86SG2 305 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 CARNMT1Q8N4J0 409 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TAMM41Q96BW9 452 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ZYG11BQ9C0D3 744 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 ADAM30Q9UKF2 790 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 WBP11Q9Y2W2 641 aaKnown RBP4.2□□□□□ -1.74
BRCA2-201ENST00000380152 XIRP2A4UGR9 3374 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 STX16-NPEPL1H3BU86 382 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 M0R2N6 131 aa4.2□□□□□ -1.74
BRCA2-201ENST00000380152 TRAFD1O14545 582 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms