RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GATA5Q9BWX5 397 aaPredicted RBP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 VN1R3Q9BXE9 311 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 PNPOQ9NVS9 261 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 TAS2R1Q9NYW7 299 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ARMCX1Q9P291 453 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 STK39Q9UEW8 545 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 STOML2Q9UJZ1 356 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 YIPF1Q9Y548 306 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 PLXNA4Q9HCM2 1894 aa10.53□□□□□ -0.72
POLR2J3-201ENST00000379340 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 E2F8A0AVK6 867 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 B2RBV5 119 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 H3BNC9 293 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 TK2O00142 265 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC22A2O15244 555 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 LDB2O43679 373 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 EFCAB14O75071 495 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 RPP40O75818 363 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 STC2O76061 302 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 UPP2O95045 317 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 GJB5O95377 273 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 SEC24AO95486 1093 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CRTAMO95727 393 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 LTA4HP09960 611 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 SBK3P0C264 359 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 ATXN8OSP0DMR3 200 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 RPL17P18621 184 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 ATP5F1P24539 256 aaPredicted RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CORO1AP31146 461 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 AVPR1AP37288 418 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 GRIA4P48058 902 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 RPL14P50914 215 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 RAP1GDS1P52306 607 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 PLD1Q13393 1074 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 PPIGQ13427 754 aaKnown RBP eCLIP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 ADGRF1Q5T601 910 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 IL31Q6EBC2 164 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 MRNIPQ6NTE8 343 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 NAPRTQ6XQN6 538 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 TREML1Q86YW5 311 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 DENND1CQ8IV53 801 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CEP97Q8IW35 865 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CMTR2Q8IYT2 770 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 ENDOVQ8N8Q3 282 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 TOP1MTQ969P6 601 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF689Q96CS4 500 aaPredicted RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 OMDQ99983 421 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 KLF16Q9BXK1 252 aaPredicted RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 EBF2Q9HAK2 575 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 RNPEPL1Q9HAU8 725 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CYP4F11Q9HBI6 524 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 POPDC3Q9HBV1 291 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 MRGBPQ9NV56 204 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 XPR1Q9UBH6 696 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 TBC1D30Q9Y2I9 924 aa10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 MRPL42Q9Y6G3 142 aaKnown RBP10.52□□□□□ -0.72
POLR2J3-201ENST00000379340 TYW5A2RUC4 315 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PRR5-ARHGAP8B1AHC4 643 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PEX11AO75192 247 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 GLP2RO95838 553 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 URODP06132 367 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 F7P08709 466 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ADSLP30566 484 aaPredicted RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ARRB2P32121 409 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ELF1P32519 619 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 GMPRP36959 345 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ARHGAP8P85298 464 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ACAP2Q15057 778 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 TECRLQ5HYJ1 363 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 C6orf163Q5TEZ5 329 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 HECTD2Q5U5R9 776 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 SEL1L3Q68CR1 1132 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 RFWD3Q6PCD5 774 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 CNSTQ6PJW8 725 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PIWIL4Q7Z3Z4 852 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 TMC7Q7Z402 723 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 MAVSQ7Z434 540 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ITIH5Q86UX2 942 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 SLC22A9Q8IVM8 553 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 TCEAL8Q8IYN2 117 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 AFAP1L2Q8N4X5 818 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ZNF781Q8N8C0 355 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 OR7D4Q8NG98 312 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 OR6P1Q8NGX9 317 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 HDAC10Q969S8 669 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 NXNL1Q96CM4 212 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 VWCEQ96DN2 955 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 CMTM5Q96DZ9 223 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 CNDP1Q96KN2 507 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 PRICKLE1Q96MT3 831 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms