RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 H7C1W4 665 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 SEC22BO75396 215 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CSH1P0DML2 217 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CSH2P0DML3 217 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CYP11B1P15538 503 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CSTF1Q05048 431 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 LIPEQ05469 1076 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MAPKAPK3Q16644 382 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 BTBD16Q32M84 506 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 KCTD8Q6ZWB6 473 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 KDELC2Q7Z4H8 507 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 AMIGO1Q86WK6 493 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CD101Q93033 1021 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PABPC5Q96DU9 382 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 FXYD6Q9H0Q3 95 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MOB1AQ9H8S9 216 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ABCB9Q9NP78 766 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MID1IP1Q9NPA3 183 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PDE10AQ9Y233 779 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 IFT140Q96RY7 1462 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PER2O15055 1255 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 FCER2P06734 321 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MTHFRP42898 656 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CTSKP43235 329 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ZBED5Q49AG3 693 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 COQ8AQ8NI60 647 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 GPER1Q99527 375 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 LSM7Q9UK45 103 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 YTHDC2Q9H6S0 1430 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 H0Y858 1186 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 SHOXO15266 292 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ZNF208O43345 1280 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ANXA3P12429 323 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 CD6P30203 668 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 WEE1P30291 646 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 GLRBP48167 497 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PPP3R1P63098 170 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 DYRK1AQ13627 763 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 GPR139Q6DWJ6 353 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 FBXO33Q7Z6M2 555 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 AMIGO2Q86SJ2 522 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 TMEM192Q8IY95 271 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 UBQLNLQ8IYU4 475 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MAB21L3Q8N8X9 362 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 COMMD4Q9H0A8 199 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MDFIC2A0A1B0GVS7 189 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 APOC3P02656 99 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ERVK-10P10266 1014 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 HTR2BP41595 481 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MOB2Q70IA6 237 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 GALNT7Q86SF2 657 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 RIOX2Q8IUF8 465 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 TRIM48Q8IWZ4 208 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MCOLN3Q8TDD5 553 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 THRSPQ92748 146 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 NELL1Q92832 810 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 EIF5A2Q9GZV4 153 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 NMRK2Q9NPI5 230 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 IGSF9Q9P2J2 1179 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 SAE1Q9UBE0 346 aaPredicted RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 JAG2Q9Y219 1238 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ZMYM2Q9UBW7 1377 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RGL2O15211 777 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GMDSO60547 372 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CIAO1O76071 339 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 IGFBP5P24593 272 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 EFNA5P52803 228 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 KLHL22Q53GT1 634 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 MTX3Q5HYI7 312 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 LINGO2Q7L985 606 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RDH11Q8TC12 318 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 UBE2E3Q969T4 207 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GPR108Q9NPR9 543 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SLC6A2P23975 617 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CASP1P29466 404 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 POLD2P49005 469 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 HARS2P49590 506 aaKnown RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 TCP10Q12799 353 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR2T34Q8NGX1 318 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OR2T3Q8NH03 318 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 ZNF570Q96NI8 536 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 TWNKQ96RR1 684 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GPRC5BQ9NZH0 403 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 NPHP3-ACAD11A0A0J9YXS1 232 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 SLC25A12O75746 678 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GPIP06744 558 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 RFX3P48380 749 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 GSCP56915 257 aaPredicted RBP8.76□□□□□ -1.01
LIG3-202ENST00000378526 SREBF2Q12772 1141 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 MPP7Q5T2T1 576 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 NDUFAF5Q5TEU4 345 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 DSELQ8IZU8 1212 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 DNAJB3Q8WWF6 145 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 CPA5Q8WXQ8 436 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 BSNDQ8WZ55 320 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 OTUB2Q96DC9 234 aa8.76□□□□□ -1.01
LIG3-202ENST00000378526 MTMR12Q9C0I1 747 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms