RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 IGFALSP35858 605 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 RABIFP47224 123 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 PPIDQ08752 370 aaKnown RBP17.11■□□□□ 0.33
RER1-202ENST00000378512 IHHQ14623 411 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 Q6ZSR6 202 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 NSMCE1Q8WV22 266 aa17.11■□□□□ 0.33
RER1-202ENST00000378512 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
RER1-202ENST00000378512 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 C6P13671 934 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 GM2AP17900 193 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 CDKN2BP42772 138 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
RER1-202ENST00000378512 LIG3P49916 1009 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 MAXP61244 160 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 TRAF2Q12933 501 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 FZD2Q14332 565 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
RER1-202ENST00000378512 ERAP2Q6P179 960 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 MFSD7Q6UXD7 560 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 DPPA4Q7L190 304 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 CBARPQ8N350 705 aaPredicted RBP17.1■□□□□ 0.33
RER1-202ENST00000378512 TPCN2Q8NHX9 752 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 WRAP53Q9BUR4 548 aaKnown RBP17.1■□□□□ 0.33
RER1-202ENST00000378512 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 SCUBE2Q9NQ36 999 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 MBNL1Q9NR56 388 aaKnown RBP17.1■□□□□ 0.33
RER1-202ENST00000378512 GPSM3Q9Y4H4 160 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 PCDHGC4Q9Y5F7 938 aa17.1■□□□□ 0.33
RER1-202ENST00000378512 SPOPO43791 374 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 LDOC1O95751 146 aaPredicted RBP17.09■□□□□ 0.33
RER1-202ENST00000378512 KRT1P04264 644 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 CCNB1P14635 433 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
RER1-202ENST00000378512 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
RER1-202ENST00000378512 CES1P23141 567 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 YPEL5P62699 121 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 CYP4F3Q08477 520 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 INAVAQ3KP66 663 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 TPRG1LQ5T0D9 272 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 CFAP58Q5T655 872 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 LIPIQ6XZB0 460 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 KATNAL2Q8IYT4 538 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 ARRDC2Q8TBH0 407 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 IL12RB2Q99665 862 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
RER1-202ENST00000378512 C1QTNF7Q9BXJ2 289 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 POLR1EQ9GZS1 481 aaKnown RBP17.09■□□□□ 0.33
RER1-202ENST00000378512 NT5MQ9NPB1 228 aa17.09■□□□□ 0.33
RER1-202ENST00000378512 APOL1O14791 398 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 PGLSO95336 258 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 GIMD1P0DJR0 217 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 ACADVLP49748 655 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 VAV2P52735 878 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.32
RER1-202ENST00000378512 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 PTAR1Q7Z6K3 402 aaPredicted RBP17.08■□□□□ 0.32
RER1-202ENST00000378512 CCDC13Q8IYE1 715 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 SLC25A45Q8N413 288 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
RER1-202ENST00000378512 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
RER1-202ENST00000378512 LGMNQ99538 433 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 SEMA3CQ99985 751 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 LACRTQ9GZZ8 138 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 DUSP10Q9Y6W6 482 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 ADAMTS20P59510 1910 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 APC2O95996 2303 aa17.08■□□□□ 0.32
RER1-202ENST00000378512 PIAS2O75928 621 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 CSF2P04141 144 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 PRKCGP05129 697 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 HLA-DQB2P05538 268 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 NME1P15531 152 aaKnown RBP17.07■□□□□ 0.32
RER1-202ENST00000378512 DGKAP23743 735 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 NR2C2P49116 596 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 PEX5P50542 639 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 LRRC14Q15048 493 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 COL28A1Q2UY09 1125 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 KDM7AQ6ZMT4 941 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 SPOCD1Q6ZMY3 1216 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 GALNT15Q8N3T1 639 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 CNTD1Q8N815 330 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 PIH1D2Q8WWB5 315 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 SCRN2Q96FV2 425 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
RER1-202ENST00000378512 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■□□□□ 8.6
RER1-202ENST00000378512 GOLGA4Q13439 2230 aaKnown RBP17.07■□□□□ 0.32
RER1-202ENST00000378512 TRIM38O00635 465 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 CTNNA1P35221 906 aaKnown RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 MARCKSL1P49006 195 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 ADCY2Q08462 1091 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 EIF2B5Q13144 721 aaKnown RBP17.06■□□□□ 0.32
RER1-202ENST00000378512 PDK1Q15118 436 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 IRF4Q15306 451 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 TFDP3Q5H9I0 405 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 NPNTQ6UXI9 565 aa17.06■□□□□ 0.32
RER1-202ENST00000378512 PARGQ86W56 976 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms