RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ESAMQ96AP7 390 aa13.25□□□□□ -0.29
NPHP4-203ENST00000378169 ASB2Q96Q27 587 aa13.25□□□□□ -0.29
NPHP4-203ENST00000378169 NMRK1Q9NWW6 199 aa13.25□□□□□ -0.29
NPHP4-203ENST00000378169 CFAP97Q9P2B7 532 aa13.25□□□□□ -0.29
NPHP4-203ENST00000378169 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 MEIS3P2A8K0S8 358 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 AZIN1O14977 448 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 TOP3BO95985 862 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 MAP3K10Q02779 954 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 KLF10Q13118 480 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CCDC149Q6ZUS6 474 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 FSTL5Q8N475 847 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 PQLC3Q8N755 202 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 GFM2Q969S9 779 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ZBED3Q96IU2 234 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 EGFL7Q9UHF1 273 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 TCAF1Q9Y4C2 921 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 RAI2Q9Y5P3 530 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 NDST3O95803 873 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ADH1AP07327 375 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ANXA5P08758 320 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 POU1F1P28069 291 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 MAPK1P28482 360 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ZNF621Q6ZSS3 439 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 HPS6Q86YV9 775 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ELMO1Q92556 727 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 HIC2Q96JB3 615 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 TIMM22Q9Y584 194 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 LAMA4Q16363 1823 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ACSL4O60488 711 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 SIN3BO75182 1162 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 KCNE1P15382 129 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CXCR3P49682 368 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 NEK3P51956 506 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ZNF132P52740 706 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 SEMG2Q02383 582 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ACSM2AQ08AH3 577 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CCDC15Q0P6D6 951 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 DYNC1I2Q13409 638 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 INSCQ1MX18 579 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 PARP15Q460N3 678 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ACSM2BQ68CK6 577 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CLEC6AQ6EIG7 209 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ARL14EPQ8N8R7 260 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 C7orf26Q96N11 449 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 SH3GL1Q99961 368 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 MIEF1Q9NQG6 463 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 IGSF9Q9P2J2 1179 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 OR51F1A6NGY5 319 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ATG16L2Q8NAA4 619 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ZNF317Q96PQ6 595 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 DENND2DQ9H6A0 471 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 TMEM51Q9NW97 253 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
NPHP4-203ENST00000378169 TNPO3Q9Y5L0 923 aaKnown RBP13.24□□□□□ -0.29
NPHP4-203ENST00000378169 ULK1O75385 1050 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 IPO13O94829 963 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 DDX5P17844 614 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 SLC10A7Q0GE19 358 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 RPL10LQ96L21 214 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 LENG8Q96PV6 779 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 GPR21Q99679 349 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 YIPF2Q9BWQ6 316 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TRIM45Q9H8W5 580 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 IMPAD1Q9NX62 359 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 MYO18AQ92614 2054 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 BEST1O76090 585 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 LDLRP01130 860 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 EDN1P05305 212 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 UGT2B4P06133 528 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 S100A3P33764 101 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 CHI3L1P36222 383 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 GPR15P49685 360 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 RPL38P63173 70 aaKnown RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 LACTB2Q53H82 288 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-203ENST00000378169 PLPP4Q5VZY2 271 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 AMIGO2Q86SJ2 522 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 DCAKDQ8WVC6 231 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 MAGED4Q96JG8 741 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 SNX8Q9Y5X2 465 aa13.23□□□□□ -0.29
NPHP4-203ENST00000378169 IGKV6-21A0A0C4DH24 114 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms