RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 VRTNQ9H8Y1 702 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 KIAA1522Q9P206 1035 aaPredicted RBP15.94■□□□□ 0.14
CKAP4-201ENST00000378026 MAP10Q9P2G4 905 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 SLC2A6Q9UGQ3 507 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 ARPC2O15144 300 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 MAN1A2O60476 641 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 XYLBO75191 536 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 SUPT7LO94864 414 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 RASAL1O95294 804 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 ALDOCP09972 364 aaKnown RBP15.94■□□□□ 0.14
CKAP4-201ENST00000378026 BDNFP23560 247 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 FAM45BPQ6NSW5 357 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 FAM83AQ86UY5 434 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 PACRGLQ8N7B6 248 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 REPS2Q8NFH8 660 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 ABHD11Q8NFV4 315 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 OR13F1Q8NGS4 319 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 FAM45AQ8TCE6 357 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 CELF6Q96J87 481 aaKnown RBP15.94■□□□□ 0.14
CKAP4-201ENST00000378026 ATXN3LQ9H3M9 355 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 LTB4R2Q9NPC1 389 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 A0A087WZ62 844 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 RSL1D1O76021 490 aaKnown RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 CYP2B6P20813 491 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ATP5F1P24539 256 aaPredicted RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SPCS2Q15005 226 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MAPK11Q15759 364 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 IMPG1Q17R60 797 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SULF1Q8IWU6 871 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ADGRG5Q8IZF4 528 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 PARP8Q8N3A8 854 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 AFAP1L2Q8N4X5 818 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 TERB1Q8NA31 727 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ALPK1Q96QP1 1244 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 FDXACB1Q9BRP7 624 aaPredicted RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MEAF6Q9HAF1 191 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 LRRC4Q9HBW1 653 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 POLE4Q9NR33 117 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 CMTM6Q9NX76 183 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 PSME2Q9UL46 239 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 USP22Q9UPT9 525 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 TRAF6Q9Y4K3 522 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MAGED1Q9Y5V3 778 aaPredicted RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SNX10Q9Y5X0 201 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SLC30A1Q9Y6M5 507 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ZBTB42B2RXF5 422 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ANGPT2O15123 496 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 RABL3Q5HYI8 236 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 RBM20Q5T481 1227 aaKnown RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 TMTC4Q5T4D3 741 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SMG8Q8ND04 991 aaKnown RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MCMBPQ9BTE3 642 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 GIT1Q9Y2X7 761 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 A8MT66 165 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MT-CYBP00156 380 aaPredicted RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 IL7RP16871 459 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 LMO2P25791 158 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 HLCSP50747 726 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 FRG1Q14331 258 aaKnown RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 CCNYL2Q5T2Q4 361 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 SYPL2Q5VXT5 272 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 ITPKCQ96DU7 683 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 CCDC138Q96M89 665 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 MRPL57Q9BQC6 102 aaKnown RBP15.93■□□□□ 0.14
CKAP4-201ENST00000378026 TRIM15Q9C019 465 aa15.93■□□□□ 0.14
CKAP4-201ENST00000378026 UBFD1O14562 309 aaKnown RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 HUS1O60921 280 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 ALBP02768 609 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 PABPC1P11940 636 aaKnown RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 CAPN3P20807 821 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 HPCAL1P37235 193 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 NDUFV1P49821 464 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 BACE1P56817 501 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 LSM3P62310 102 aaKnown RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 ADIGQ0VDE8 80 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 POLD3Q15054 466 aaPredicted RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 KCNJ8Q15842 424 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF470Q6ECI4 717 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 DSG4Q86SJ6 1040 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 RAVER1Q8IY67 606 aaKnown RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 NPWQ8N729 165 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SIAEQ9HAT2 523 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 POU2F3Q9UKI9 436 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SIP14410 1827 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 TRIM64A6NGJ6 449 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 PPP6CO00743 305 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 EGFRP00533 1210 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 PCNAP12004 261 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SHMT2P34897 504 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SLC1A2P43004 574 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SNX16P57768 344 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 KCNC4Q03721 635 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 TRPV3Q8NET8 790 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 IPMKQ8NFU5 416 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SLC2A14Q8TDB8 520 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 CCDC97Q96F63 343 aaPredicted RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 MYRFLQ96LU7 910 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms