RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TNNT3P45378 269 aaPredicted RBP21.39■■□□□ 1.01
CBWD3-202ENST00000377342 TAS2R38P59533 333 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 HLTFQ14527 1009 aaKnown RBP eCLIP21.39■■□□□ 1.01
CBWD3-202ENST00000377342 CERCAMQ5T4B2 595 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 MPP5Q8N3R9 675 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 HDDC3Q8N4P3 179 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 DNAAF3Q8N9W5 541 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 MYRIPQ8NFW9 859 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 PBXIP1Q96AQ6 731 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 LYSMD1Q96S90 227 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 COL25A1Q9BXS0 654 aaPredicted RBP21.39■■□□□ 1.01
CBWD3-202ENST00000377342 DYRK4Q9NR20 520 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 EBF1Q9UH73 591 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 SCML1Q9UN30 329 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 BPTFQ12830 3046 aa21.39■■□□□ 1.01
CBWD3-202ENST00000377342 AREL1O15033 823 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 PPFIA2O75334 1257 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 APBB3O95704 486 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 LHCGRP22888 699 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 HNF1BP35680 557 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 MMP12P39900 470 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 CCR3P51677 355 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 SESN2P58004 480 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 CRADDP78560 199 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 SARNPP82979 210 aaKnown RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 RALGDSQ12967 914 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 HIF1AQ16665 826 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 TTC31Q49AM3 519 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 BMP8AQ7Z5Y6 402 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 GPR161Q8N6U8 529 aaKnown RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 SCRN2Q96FV2 425 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 FRMD8Q9BZ67 464 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 SYBUQ9NX95 663 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 FBXL12Q9NXK8 326 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 USP36Q9P275 1121 aaKnown RBP21.38■■□□□ 1.01
CBWD3-202ENST00000377342 B4GALT6Q9UBX8 382 aa21.38■■□□□ 1.01
CBWD3-202ENST00000377342 DOCK9Q9BZ29 2069 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 E7ESA3 106 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 TNFRSF10AO00220 468 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 RNASEH2AO75792 299 aaKnown RBP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 MGAT1P26572 445 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 CXCL12P48061 93 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 POLR2LP62875 67 aaKnown RBP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 CDKN3Q16667 212 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 WDR93Q6P2C0 686 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 FBXL19Q6PCT2 694 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 USP45Q70EL2 814 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 TTC7BQ86TV6 843 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 TSPAN33Q86UF1 283 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 C11orf16Q9NQ32 467 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 PRMT8Q9NR22 394 aaPredicted RBP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 SPATA6Q9NWH7 488 aaPredicted RBP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 BCCIPQ9P287 314 aaKnown RBP eCLIP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 ZNF711Q9Y462 761 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 CUL9Q8IWT3 2517 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 PLXNA2O75051 1894 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 AURKAO14965 403 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 TPMTP51580 245 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 DHX9Q08211 1270 aaKnown RBP21.37■■□□□ 1.01
CBWD3-202ENST00000377342 CBLBQ13191 982 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 POU6F1Q14863 301 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 TMEM31Q5JXX7 168 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 USP30Q70CQ3 517 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 FBXL6Q8N531 539 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 BLOC1S5Q8TDH9 187 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 SIGLEC10Q96LC7 697 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 FMO2Q99518 471 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 FADS3Q9Y5Q0 445 aa21.37■■□□□ 1.01
CBWD3-202ENST00000377342 ALDH1A2O94788 518 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 IGLV3-19P01714 112 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 PXNP49023 591 aaPredicted RBP21.36■■□□□ 1.01
CBWD3-202ENST00000377342 ARL4CP56559 192 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 FASTKD3Q14CZ7 662 aaKnown RBP21.36■■□□□ 1.01
CBWD3-202ENST00000377342 DENND2CQ68D51 928 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.36■■□□□ 1.01
CBWD3-202ENST00000377342 DPPA4Q7L190 304 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 LYSMD3Q7Z3D4 306 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 PDIK1LQ8N165 341 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 CAMKK1Q8N5S9 505 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 EIF1ADQ8N9N8 165 aaKnown RBP21.36■■□□□ 1.01
CBWD3-202ENST00000377342 EID2BQ96D98 161 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 OMDQ99983 421 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 PARD6BQ9BYG5 372 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 TPSD1Q9BZJ3 242 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 MAGEE1Q9HCI5 957 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 RAB21Q9UL25 225 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 FZD4Q9ULV1 537 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 TRPM6Q9BX84 2022 aa21.36■■□□□ 1.01
CBWD3-202ENST00000377342 A8MX80 341 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 AP3B1O00203 1094 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 ACADMP11310 421 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 TDGF1P13385 188 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 XPAP23025 273 aaPredicted RBP21.35■■□□□ 1.01
CBWD3-202ENST00000377342 SUOXP51687 545 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 ADPRHP54922 357 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 FAM193AP78312 1265 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 BBS9Q3SYG4 887 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 CCDC38Q502W7 563 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 CRTC1Q6UUV9 634 aa21.35■■□□□ 1.01
CBWD3-202ENST00000377342 IGDCC3Q8IVU1 814 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms