RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 ZNF140P52738 457 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 AQP5P55064 265 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ZBTB16Q05516 673 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PTPRCAPQ14761 206 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 TSNAXIP1Q2TAA8 658 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 INO80DQ53TQ3 878 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 BBS7Q8IWZ6 715 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 TMEM151AQ8N4L1 468 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 LPCAT1Q8NF37 534 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PIWIL2Q8TC59 973 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 BHMTQ93088 406 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 KLHL29Q96CT2 875 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 RMDN1Q96DB5 314 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 OLFM1Q99784 485 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 SUDS3Q9H7L9 328 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 DNMT3BQ9UBC3 853 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 TRIM33Q9UPN9 1127 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 CCDC162PA2VCL2 907 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TMEM114B3SHH9 223 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TRIM13O60858 407 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 CRTAMO95727 393 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 S1PR4O95977 384 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 NQO1P15559 274 aaKnown RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 PFKLP17858 780 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TRAF2Q12933 501 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 DLG1Q12959 904 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 CTC1Q2NKJ3 1217 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 PPM1LQ5SGD2 360 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 NCEH1Q6PIU2 408 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 ATG14Q6ZNE5 492 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TBC1D1Q86TI0 1168 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 LDB1Q86U70 411 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 WDR75Q8IWA0 830 aaKnown RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 FSTL5Q8N475 847 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 GPR150Q8NGU9 434 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 DDI1Q8WTU0 396 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 TSPAN17Q96FV3 270 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 GPR78Q96P69 363 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 SAR1AQ9NR31 198 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 NLE1Q9NVX2 485 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-202ENST00000376806 OXSMQ9NWU1 459 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 XPR1Q9UBH6 696 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 PCDHGC4Q9Y5F7 938 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 SCN8AQ9UQD0 1980 aa16.87■□□□□ 0.29
HLA-A-202ENST00000376806 NOTCH4Q99466 2003 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 TLL1O43897 1013 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 GLP2RO95838 553 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 PDHA1P08559 390 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 T-ENOLP0DO92 83 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 BMPR1AP36894 532 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 KPNA2P52292 529 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 RHOAP61586 193 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 KCNJ2P63252 427 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 TAF1AQ15573 450 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 MPPE1Q53F39 396 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 HECTD2Q5U5R9 776 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 NAPRTQ6XQN6 538 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 GLT6D1Q7Z4J2 308 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 ALYREFQ86V81 257 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 PACS2Q86VP3 889 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 PNPLA1Q8N8W4 532 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 NXNL1Q96CM4 212 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 PRR11Q96HE9 360 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 CATSPERZQ9NTU4 200 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 HAO1Q9UJM8 370 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 FCF1Q9Y324 198 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 ZNF106Q9H2Y7 1883 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 TARM1B6A8C7 271 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 LEFTY2O00292 366 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 FCHO1O14526 889 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 CD3EAPO15446 510 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 CBX6O95503 412 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 OGNP20774 298 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 CLCN4P51793 760 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 ILF2Q12905 390 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 SEMA3AQ14563 771 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 LIPMQ5VYY2 423 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 KIF2BQ8N4N8 673 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 MRPL43Q8N983 215 aaKnown RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 TTC8Q8TAM2 541 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 GATA5Q9BWX5 397 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-202ENST00000376806 SLC46A2Q9BY10 475 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 LRMDAQ9H2I8 198 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 ARHGEF3Q9NR81 526 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 HCFC1R1Q9NWW0 138 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
HLA-A-202ENST00000376806 MYOFQ9NZM1 2061 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 HSPA4LO95757 839 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 CCR2P41597 374 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 PRKAA2P54646 552 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 MPP7Q5T2T1 576 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 FAM91A1Q658Y4 838 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 APCDD1Q8J025 514 aa16.85■□□□□ 0.29
HLA-A-202ENST00000376806 MDGA1Q8NFP4 955 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms