RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 HSF4Q9ULV5 492 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CNPY2Q9Y2B0 182 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CLDN16Q9Y5I7 305 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PSAT1Q9Y617 370 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 MAGEA13PA6NCF6 341 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HSPB2A8KAH6 182 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HNRNPCL2B2RXH8 293 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HSPA12AO43301 675 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 ZIC3O60481 467 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 TSPAN3O60637 253 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 IGHV4-30-4P0DP06 118 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 SRD5A1P18405 259 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CENPAP49450 140 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PEX5P50542 639 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CLCN3P51790 818 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 ZNF132P52740 706 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HDAC4P56524 1084 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HILS1P60008 231 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 VAMP2P63027 116 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 POU3F1Q03052 451 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 ZBTB17Q13105 803 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 RBBP5Q15291 538 aaKnown RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 MAPRE1Q15691 268 aaKnown RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 HSPB2Q16082 182 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 WDR78Q5VTH9 848 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 SHFQ7M4L6 423 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PARP16Q8N5Y8 322 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PCYOX1LQ8NBM8 494 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 ST8SIA4Q92187 359 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 NUF2Q9BZD4 464 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PAIP1Q9H074 479 aaKnown RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 MROH8Q9H579 483 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 STN1Q9H668 368 aaKnown RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 PREBQ9HCU5 417 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CYSLTR2Q9NS75 346 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 SPATS2LQ9NUQ6 558 aaKnown RBP2.25□□□□□ -2.05
VPS13A-206ENST00000376646 TMEM98Q9Y2Y6 226 aa2.25□□□□□ -2.05
VPS13A-206ENST00000376646 CCDC196A0A1B0GTZ2 297 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 IFNL4K9M1U5 179 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CEP104O60308 925 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 IFIT1P09914 478 aaKnown RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 WEE2P0C1S8 567 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 MYF6P23409 242 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 DGKAP23743 735 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 GOLGA8FQ08AF8 430 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 GALNT2Q10471 571 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 NFIL3Q16649 462 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 MRGPRG-AS1Q2M3A8 158 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 SOWAHAQ2M3V2 549 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ESCO2Q56NI9 601 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 FAAH2Q6GMR7 532 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 LRRC8EQ6NSJ5 796 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 FAM180BQ6P0A1 224 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 DSTYKQ6XUX3 929 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 SATL1Q86VE3 508 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ZC3HC1Q86WB0 502 aaKnown RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 NAGSQ8N159 534 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CREB3L4Q8TEY5 395 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 RND1Q92730 232 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ZUFSPQ96AP4 578 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ZBTB10Q96DT7 871 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 MTBPQ96DY7 904 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 EPYCQ99645 322 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 AGXT2Q9BYV1 514 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 JMJD4Q9H9V9 463 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ENTPD7Q9NQZ7 604 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 IRAK4Q9NWZ3 460 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ANKRD10Q9NXR5 420 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 NDRG3Q9UGV2 375 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 PAM16Q9Y3D7 125 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ZNF711Q9Y462 761 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 TYW5A2RUC4 315 aaKnown RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CPED1A4D0V7 1026 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 PABPN1LA6NDY0 278 aaKnown RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CBY3A6NI87 242 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 PER2O15055 1255 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 KIF1CO43896 1103 aaKnown RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 TBX18O95935 607 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 GGT5P36269 586 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CASP6P55212 293 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 ARHGEF6Q15052 776 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 GPR68Q15743 365 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 CALCRLQ16602 461 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 NCAPH2Q6IBW4 605 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 DENND1BQ6P3S1 775 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 UNQ6126/PRO20091Q6UXV3 157 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 B3GNT6Q6ZMB0 384 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 PRSS45Q7RTY3 260 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 SLC9B2Q86UD5 537 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 NOXA1Q86UR1 476 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 FOXP4Q8IVH2 680 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 GJC3Q8NFK1 279 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 SPATA22Q8NHS9 363 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 RNF125Q96EQ8 232 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 LRFN5Q96NI6 719 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 OR1F2PQ96R84 312 aa2.24□□□□□ -2.05
VPS13A-206ENST00000376646 PHF7Q9BWX1 381 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-206ENST00000376646 TTYH1Q9H313 450 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms