RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 SLC22A1O15245 554 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 TEX28O15482 410 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 PHGDHO43175 533 aaKnown RBP12.21□□□□□ -0.45
C9orf3-203ENST00000375315 CRYZL1O95825 349 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 APOC2P02655 101 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 CALB1P05937 261 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 KRT7P08729 469 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 NR4A2P43354 598 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 POU5F1BQ06416 359 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 TRAP1Q12931 704 aaKnown RBP12.21□□□□□ -0.45
C9orf3-203ENST00000375315 INSCQ1MX18 579 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 SLX4IPQ5VYV7 408 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 MAPK15Q8TD08 544 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 SEPT8Q92599 483 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 MAGEE1Q9HCI5 957 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 PAK5Q9P286 719 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 Q9Y3F1 56 aa12.21□□□□□ -0.45
C9orf3-203ENST00000375315 LOC105371267A0A1B0GV96 52 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 NEMP1O14524 444 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 CD1EP15812 388 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 SCN1AP35498 2009 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 ACADSBP45954 432 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 HLCSP50747 726 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 NKX2-5P52952 324 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 CCL23P55773 120 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 BCAR1P56945 870 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 TAP1Q03518 808 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 CHRNEQ04844 493 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 HADHQ16836 314 aaKnown RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 CDO1Q16878 200 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 SLC36A3Q495N2 470 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 INTS11Q5TA45 600 aaKnown RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 ZNF280DQ6N043 979 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 UGT3A1Q6NUS8 523 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 GALNT13Q8IUC8 556 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 PARP8Q8N3A8 854 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 ZCCHC7Q8N3Z6 543 aaKnown RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 CBR4Q8N4T8 237 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 SPATA18Q8TC71 538 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 LPGAT1Q92604 370 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 FEM1CQ96JP0 617 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 FAM105AQ9NUU6 356 aa12.21□□□□□ -0.46
C9orf3-203ENST00000375315 RABL2AQ9UBK7 228 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-203ENST00000375315 RNF103-CHMP3A0A140T963 221 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 HEATR9A2RTY3 570 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TPP1O14773 563 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TIPRLO75663 272 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 ETFBP38117 255 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 AP3M2P53677 418 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 IST1P53990 364 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PRKAA2P54646 552 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 STX1BP61266 288 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PSME3P61289 254 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PHC1P78364 1004 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TSPY1Q01534 308 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 IFRD2Q12894 506 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 BPIFB6Q8NFQ5 453 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SLCO4A1Q96BD0 722 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 MAGED4Q96JG8 741 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 NEK6Q9HC98 313 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 HACD3Q9P035 362 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 DNMT3BQ9UBC3 853 aaKnown RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 UBL4AP11441 157 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PRKACBP22694 351 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 EEF1B2P24534 225 aaKnown RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 CXCR2P25025 360 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 BMPR1AP36894 532 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 LEPRP48357 1165 aaKnown RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 NRLP54845 237 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 LINC00299Q6ZSB3 139 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SCLYQ96I15 445 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SNX25Q9H3E2 840 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 WDR55Q9H6Y2 383 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 FANCEQ9HB96 536 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 AKIP1Q9NQ31 210 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 KLQ9UEF7 1012 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 CYTH4Q9UIA0 394 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SYNJ2BP-COX16A0A087WUM0 186 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 IDH3BO43837 385 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 GABBR2O75899 941 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SEC14L2O76054 403 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 KRT6AP02538 564 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 AMHP03971 560 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms