RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TRIM13O60858 407 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SBK3P0C264 359 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DDX6P26196 483 aaKnown RBP eCLIP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 AVPR1AP37288 418 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CLCN4P51793 760 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 UBE3AQ05086 875 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TAF1AQ15573 450 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CTC1Q2NKJ3 1217 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ZNF789Q5FWF6 425 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PPM1LQ5SGD2 360 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RBM20Q5T481 1227 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MFN1Q8IWA4 741 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 BBS7Q8IWZ6 715 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PPP4R1Q8TF05 950 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 C2orf49Q9BVC5 232 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ADGRE3Q9BY15 652 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RUVBL2Q9Y230 463 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SPO11Q9Y5K1 396 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NUMBLQ9Y6R0 609 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MYOFQ9NZM1 2061 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CCDC162PA2VCL2 907 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HIDE1A8MVS5 230 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LEFTY2O00292 366 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TLL1O43897 1013 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HNRNPCL1O60812 293 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LYPLA1O75608 230 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GLP2RO95838 553 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GOT2P00505 430 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MYL4P12829 197 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ALOX15P16050 662 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SERPINB3P29508 390 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HSF5Q4G112 596 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PLPP4Q5VZY2 271 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MRNIPQ6NTE8 343 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LINGO4Q6UY18 593 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 WDR75Q8IWA0 830 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OR13C4Q8NGS5 318 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SPPL3Q8TCT6 385 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ACDQ96AP0 544 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KLHL29Q96CT2 875 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RMDN1Q96DB5 314 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC46A2Q9BY10 475 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TLR9Q9NR96 1032 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MARCH4Q9P2E8 410 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DNAJC16Q9Y2G8 782 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SOBPA7XYQ1 873 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TK2O00142 265 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CCL22O00626 93 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CD3EAPO15446 510 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CCL16O15467 120 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 WISP3O95389 354 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ARRB2P32121 409 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC26A3P40879 764 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 AQP5P55064 265 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RHOAP61586 193 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 AP1S1P61966 158 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TRAF2Q12933 501 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DLG1Q12959 904 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ZNF460Q14592 562 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TYSND1Q2T9J0 566 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HECTD2Q5U5R9 776 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LIPMQ5VYY2 423 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FAM45BPQ6NSW5 357 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RETSATQ6NUM9 610 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GLT6D1Q7Z4J2 308 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TBC1D1Q86TI0 1168 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 METTL3Q86U44 580 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OR4L1Q8NH43 312 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TTC8Q8TAM2 541 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FAM45AQ8TCE6 357 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DDI1Q8WTU0 396 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 POF1BQ8WVV4 589 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 INPP5DQ92835 1189 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CDKN2AIPNLQ96HQ2 116 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OLFM1Q99784 485 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MRPL57Q9BQC6 102 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TUBB6Q9BUF5 446 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LRMDAQ9H2I8 198 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CATSPERZQ9NTU4 200 aa18.06■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NUP210Q8TEM1 1887 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OR51F1A6NGY5 319 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FZD6O60353 706 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PDHA1P08559 390 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PIRTP0C851 137 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 T-ENOLP0DO92 83 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NQO1P15559 274 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HOXA9P31269 272 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ZBTB16Q05516 673 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KRT72Q14CN4 511 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 AFTPHQ6ULP2 937 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ATG14Q6ZNE5 492 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RNF135Q8IUD6 432 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LPCAT1Q8NF37 534 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms