RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PIGNO95427 931 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CXCL14O95715 111 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MMP2P08253 660 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SBK3P0C264 359 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PTDSS1P48651 473 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 YBEYP58557 167 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PRAMEP78395 509 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 ZNF235Q14590 738 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 FAM83EQ2M2I3 478 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SLC9B1Q4ZJI4 515 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SIRPB2Q5JXA9 342 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 METTL21CQ5VZV1 264 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SEL1L3Q68CR1 1132 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PRSS55Q6UWB4 352 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 C2orf15Q8WU43 125 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CLPTM1LQ96KA5 538 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 NDNQ99608 321 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 OMDQ99983 421 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MRPL57Q9BQC6 102 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 TCF7L2Q9NQB0 619 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 MATN2O00339 956 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 AURKAO14965 403 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 HDAC3O15379 428 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 DLX3O60479 287 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 KRT34O76011 436 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 KRT36O76013 467 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 PSMG1O95456 288 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 TACR2P21452 398 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 MPSTP25325 297 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 ATP5C1P36542 298 aaKnown RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 LTBRP36941 435 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 ACVRL1P37023 503 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 KCNQ1P51787 676 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 SLC25A3Q00325 362 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 TAF11Q15544 211 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 NET1Q7Z628 596 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 RNF135Q8IUD6 432 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 LGI2Q8N0V4 545 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 HEXDCQ8WVB3 486 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 TSPAN17Q96FV3 270 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 PPP1R36Q96LQ0 422 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 ZNF512Q96ME7 567 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 CDK5RAP1Q96SZ6 601 aaKnown RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 SEMA3CQ99985 751 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 SHCBP1LQ9BZQ2 653 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 DNMT3LQ9UJW3 386 aa12.15□□□□□ -0.46
HMGCL-202ENST00000374487 NYNRINQ9P2P1 1898 aaKnown RBP12.15□□□□□ -0.46
HMGCL-202ENST00000374487 GOLGA8QA0A0J9YX86 632 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 GOLGA8OA6NCC3 632 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 GOLGA8NF8WBI6 632 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TBC1D4O60343 1298 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 VNN2O95498 520 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 GLP2RO95838 553 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TFEBP19484 476 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 KCNA5P22460 613 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 PPM1AP35813 382 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.47
HMGCL-202ENST00000374487 CLCN5P51795 746 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 HK2P52789 917 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 CSHL1Q14406 222 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TRMT5Q32P41 509 aaKnown RBP12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 NADSYN1Q6IA69 706 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 KLC3Q6P597 504 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TLDC1Q6P9B6 456 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 DDX53Q86TM3 631 aaKnown RBP12.15□□□□□ -0.47
HMGCL-202ENST00000374487 PGBD5Q8N414 524 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 OR13J1Q8NGT2 312 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 CFAP61Q8NHU2 1237 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 ARRDC2Q8TBH0 407 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 MAPK15Q8TD08 544 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.47
HMGCL-202ENST00000374487 HDAC10Q969S8 669 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 SGF29Q96ES7 293 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 GPR78Q96P69 363 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 APOL5Q9BWW9 433 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 ZBP1Q9H171 429 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 CLDND1Q9NY35 253 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 NCKIPSDQ9NZQ3 722 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.47
HMGCL-202ENST00000374487 TARM1B6A8C7 271 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms