RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 DEF8Q6ZN54 512 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 POC5Q8NA72 575 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 PPCDCQ96CD2 204 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 PLEKHG4BQ96PX9 1271 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 AGXT2Q9BYV1 514 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 NECTIN3Q9NQS3 549 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 AGO1Q9UL18 857 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 CACNB4O00305 520 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 RFXANKO14593 260 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 BUD23O43709 281 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 SLC28A2O43868 658 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 CRADDP78560 199 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 TAPT1Q6NXT6 567 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 POLNQ7Z5Q5 900 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ART4Q93070 314 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 C1QTNF1Q9BXJ1 281 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SNX3O60493 162 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SCN2BO60939 215 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 FGF19O95750 216 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 GLRA2P23416 452 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PJA1Q8NG27 643 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 OR4L1Q8NH43 312 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 TIFAQ96CG3 184 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 HAVCR1Q96D42 359 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 EBNA1BP2Q99848 306 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CHID1Q9BWS9 393 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ACE2Q9BYF1 805 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 LRRC19Q9H756 370 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PLGRKTQ9HBL7 147 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SEMA3GQ9NS98 782 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 BBIP1A8MTZ0 92 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ERAL1O75616 437 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 LDOC1O95751 146 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 IL1BP01584 269 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 NR2F6P10588 404 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 IGFBP4P22692 258 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 SLC6A2P23975 617 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 FAUP35544 74 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 TAS2R41P59536 307 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PDK4Q16654 411 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 MIIPQ5JXC2 388 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PIGZQ86VD9 579 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 OR8D1Q8WZ84 308 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 EXD2Q9NVH0 621 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 MAGEL2Q9UJ55 1249 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 OGDHLQ9ULD0 1010 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PSMD11O00231 422 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 MAFO75444 373 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 DDNO94850 711 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 OGNP20774 298 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CDK9P50750 372 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 PPP3CAQ08209 521 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 RBBP4Q09028 425 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 AUHQ13825 339 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 ESRP1Q6NXG1 681 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CHSY3Q70JA7 882 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 FUKQ8N0W3 1084 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 FIBCD1Q8N539 461 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 OR10H5Q8NGA6 315 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 NEK7Q8TDX7 302 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ZNF483Q8TF39 744 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CAPSLQ8WWF8 208 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 TM6SF2Q9BZW4 377 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 TRPS1Q9UHF7 1281 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 C2CD2Q9Y426 696 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PGRMC2O15173 223 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 AHCYL1O43865 530 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 OR5F1O95221 314 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 KELP23276 732 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 CDH5P33151 784 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CTNNB1P35222 781 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 ARFIP1P53367 373 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 CDK18Q07002 472 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 CNSTQ6PJW8 725 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 YTHDF3Q7Z739 585 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 ABCB10Q9NRK6 738 aa11.57□□□□□ -0.56
VCL-202ENST00000372755 PRPF19Q9UMS4 504 aaKnown RBP11.57□□□□□ -0.56
VCL-202ENST00000372755 WNT10BO00744 389 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 ANPEPP15144 967 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 HNF4AP41235 474 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 COPS8Q99627 209 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 MIR1-1HGQ9H1L0 117 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 BTN3A3O00478 584 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 FGBP02675 491 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 IL12AP29459 219 aa11.56□□□□□ -0.56
VCL-202ENST00000372755 RPL5P46777 297 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms