RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SNX27Q96L92 541 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 C1orf50Q9BV19 199 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 TBC1D10AQ9BXI6 508 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 SOHLH2Q9NX45 425 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 SLC17A7Q9P2U7 560 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 CORO2BQ9UQ03 480 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 IRGCQ6NXR0 463 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 C8orf59Q8N0T1 100 aaPredicted RBP19.73■□□□□ 0.75
LMO4-202ENST00000370544 SLC4A11Q8NBS3 891 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 QKIQ96PU8 341 aaKnown RBP eCLIP19.73■□□□□ 0.755e-7■■■■□ 22.6
LMO4-202ENST00000370544 OSBPL6Q9BZF3 934 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 SLCO1B3Q9NPD5 702 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 CHKBQ9Y259 395 aa19.73■□□□□ 0.75
LMO4-202ENST00000370544 MDM4O15151 490 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 GRM6O15303 877 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 ELFN1P0C7U0 828 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 CDKN2BP42772 138 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 IRAK1BP1Q5VVH5 260 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 ZC3H7AQ8IWR0 971 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 CLYBLQ8N0X4 340 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 PLD5Q8N7P1 536 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 ZSCAN32Q9NX65 697 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 GGA2Q9UJY4 613 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 ENO2P09104 434 aaPredicted RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 PMF1Q6P1K2 205 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 APTXQ7Z2E3 356 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 RBM23Q86U06 439 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 MAGEE2Q8TD90 523 aaPredicted RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 TEKT5Q96M29 485 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 C6orf62Q9GZU0 229 aaPredicted RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 SLC25A14O95258 325 aaPredicted RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 CORO1AP31146 461 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 TNK2Q07912 1038 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 EPS8Q12929 822 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 EPB41L4BQ9H329 900 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 SERHL2Q9H4I8 314 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 SERHLQ9NQF3 203 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 BCLAF3A2AJT9 711 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 RPP40O75818 363 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 GRM3Q14832 879 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 SPRYD7Q5W111 196 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 SLC26A9Q7LBE3 791 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 PTCD3Q96EY7 689 aaKnown RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
LMO4-202ENST00000370544 ANGPT4Q9Y264 503 aa19.72■□□□□ 0.75
LMO4-202ENST00000370544 A0A087WXM4 84 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 GBE1Q04446 702 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 MACC1Q6ZN28 852 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 NAT16Q8N8M0 369 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 DPEP3Q9H4B8 488 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 PACSIN3Q9UKS6 424 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 ZNHIT3Q15649 155 aaPredicted RBP19.71■□□□□ 0.75
LMO4-202ENST00000370544 GPR158Q5T848 1215 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 SLC44A1Q8WWI5 657 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 ATP6V1HQ9UI12 483 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 RHBDF2Q6PJF5 856 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 OXCT2Q9BYC2 517 aaPredicted RBP19.71■□□□□ 0.75
LMO4-202ENST00000370544 KLHL1Q9NR64 748 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 PNPOQ9NVS9 261 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 VPS4AQ9UN37 437 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 TBC1D30Q9Y2I9 924 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 BPGMP07738 259 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 SLC35G4P0C7Q5 338 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 HTR1BP28222 390 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 CPSF6Q16630 551 aaKnown RBP eCLIP19.71■□□□□ 0.75
LMO4-202ENST00000370544 MPPE1Q53F39 396 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 MPP4Q96JB8 637 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 MFSD1Q9H3U5 465 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 ZFYVE1Q9HBF4 777 aa19.71■□□□□ 0.75
LMO4-202ENST00000370544 ARIH1Q9Y4X5 557 aaPredicted RBP19.71■□□□□ 0.75
LMO4-202ENST00000370544 A0A0G2JLL6 359 aaPredicted RBP19.7■□□□□ 0.74
LMO4-202ENST00000370544 TSPAN19P0C672 248 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 IDO1P14902 403 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 BNIP2Q12982 314 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 PRKG2Q13237 762 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 PRRT2Q7Z6L0 340 aaPredicted RBP19.7■□□□□ 0.74
LMO4-202ENST00000370544 CHPFQ8IZ52 775 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 DQX1Q8TE96 717 aaKnown RBP19.7■□□□□ 0.74
LMO4-202ENST00000370544 RCN3Q96D15 328 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 DCUN1D5Q9BTE7 237 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 KRT75O95678 551 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 GNRH1P01148 92 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 RHOQP17081 205 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 LRMDAQ9H2I8 198 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 ZNF232Q9UNY5 417 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 STXBP5LQ9Y2K9 1186 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 FMN2Q9NZ56 1722 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 ATP6AP2A0A1C7CYW4 349 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 NPEPPSL1A6NEC2 478 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 EDF1O60869 148 aaKnown RBP19.7■□□□□ 0.74
LMO4-202ENST00000370544 ATP6AP2O75787 350 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 FNBP1LQ5T0N5 605 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 CDC73Q6P1J9 531 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 POMGNT2Q8NAT1 580 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 FERD3LQ96RJ6 166 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 GBA3Q9H227 469 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 PIK3C2AO00443 1686 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 TCRBV7S2A1N4TA0A589 114 aa19.7■□□□□ 0.74
LMO4-202ENST00000370544 UQCRBP14927 111 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms