RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 R3HDMLQ9H3Y0 253 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 ELOVL6Q9H5J4 265 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 RNF186Q9NXI6 227 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 CFAP97Q9P2B7 532 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC13A4Q9UKG4 626 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 CHKBQ9Y259 395 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 MRPS23Q9Y3D9 190 aaKnown RBP5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 RAI2Q9Y5P3 530 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 ZFP37Q9Y6Q3 630 aaPredicted RBP5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 ARHGAP10A1A4S6 786 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 MTMR11A4FU01 709 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 RGSL1A5PLK6 1076 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 DCLK1O15075 740 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 GRM6O15303 877 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 BUD23O43709 281 aaKnown RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 TBC1D4O60343 1298 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 HNRNPCP07910 306 aaKnown RBP eCLIP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 PFKMP08237 780 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 CLTBP09497 229 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 VCLP18206 1134 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 LBPP18428 481 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 TFE3P19532 575 aaPredicted RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 TCN1P20061 433 aaPredicted RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 ME2P23368 584 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 PSMA4P25789 261 aaKnown RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 PTDSS1P48651 473 aaKnown RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 NRLP54845 237 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 IL1RL1Q01638 556 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 DSG1Q02413 1049 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC34A1Q06495 639 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 MOGSQ13724 837 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 SQLEQ14534 574 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 NR6A1Q15406 480 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 ESRP1Q6NXG1 681 aaKnown RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 IRGCQ6NXR0 463 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 CLYBLQ8N0X4 340 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 MPP5Q8N3R9 675 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 MAB21L3Q8N8X9 362 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 RP9Q8TA86 221 aaKnown RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF461Q8TAF7 563 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 METTL6Q8TCB7 284 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 HEXDCQ8WVB3 486 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 PPP1R16AQ96I34 528 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 ECSITQ9BQ95 431 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 BBS2Q9BXC9 721 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 TRIM45Q9H8W5 580 aaPredicted RBP5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 CAB39LQ9H9S4 337 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 TMEM248Q9NWD8 314 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 DNAJC28Q9NX36 388 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 MIOSQ9NXC5 875 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 OPTCQ9UBM4 332 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 CROTQ9UKG9 612 aa5.34□□□□□ -1.56
SMNDC1-202ENST00000369603 PSMD12O00232 456 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 NR5A2O00482 541 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PRMT5O14744 637 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CCNT2O60583 730 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 BEST1O76090 585 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 IPO13O94829 963 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PKMP14618 531 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 EEF1B2P24534 225 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 WEE1P30291 646 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ADSLP30566 484 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MC4RP32245 332 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ROR2Q01974 943 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 BLMHQ13867 455 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 NFYCQ13952 458 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DPYSQ14117 519 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ACAP2Q15057 778 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 GALNTL6Q49A17 601 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 SAMD4BQ5PRF9 694 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PM20D1Q6GTS8 502 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 NET1Q7Z628 596 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MILR1Q7Z6M3 343 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF280BQ86YH2 543 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 OR7D4Q8NG98 312 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MAGEB10Q96LZ2 347 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 HERPUD2Q9BSE4 406 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CCDC28BQ9BUN5 200 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ING2Q9H160 280 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ZDHHC6Q9H6R6 413 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 NDUFAF1Q9Y375 327 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 YIPF1Q9Y548 306 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FOCADQ5VW36 1801 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FOXO6A8MYZ6 492 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 TMEM189-UBE2V1I3L0A0 370 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MRASO14807 208 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ZBTB14O43829 449 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 WFS1O76024 890 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PROCP04070 461 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 HLA-DQB2P05538 268 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 GALTP07902 379 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ANXA5P08758 320 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PIRTP0C851 137 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CCL5P13501 91 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 VAV1P15498 845 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ATP6V1C1P21283 382 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FOXN2P32314 431 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 GRIA1P42261 906 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PKDCCQ504Y2 493 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM171BQ6P995 826 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms