RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 APOOQ9BUR5 198 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 CPEB1Q9BZB8 566 aaKnown RBP10.43□□□□□ -0.74
CLRN3-201ENST00000368671 SUV39H2Q9H5I1 410 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 PCDH12Q9NPG4 1184 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 FANCLQ9NW38 375 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 GPATCH2LQ9NWQ4 482 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 KLQ9UEF7 1012 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 GPR34Q9UPC5 381 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 OR1A2Q9Y585 309 aa10.43□□□□□ -0.74
CLRN3-201ENST00000368671 TCRBV5S1A1TA0A578 114 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 CAPN8A6NHC0 703 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 TMEM110-MUSTN1A8MSY1 372 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 J3KR12 359 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 AGRPO00253 132 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 FGF10O15520 208 aaPredicted RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 TNFP01375 233 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 RPLP0P05388 317 aaKnown RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 DESP17661 470 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 LIG3P49916 1009 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 SUOXP51687 545 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 SRP54P61011 504 aaKnown RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 CCL7P80098 99 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 SKOR1P84550 965 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 GRM3Q14832 879 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 UGP2Q16851 508 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 CCDC81Q6ZN84 652 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 ZSWIM9Q86XI8 627 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 JAMLQ86YT9 394 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 UMODL1-AS1Q8N2C9 162 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 ATL2Q8NHH9 583 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 TTC9Q92623 222 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 CELF6Q96J87 481 aaKnown RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 GFM1Q96RP9 751 aaKnown RBP10.42□□□□□ -0.74
CLRN3-201ENST00000368671 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 SEMA4CQ9C0C4 833 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 ATRXP46100 2492 aa10.42□□□□□ -0.74
CLRN3-201ENST00000368671 TSPAN11A1L157 253 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 K7ENP7 123 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 BUB1BO60566 1050 aaPredicted RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 F12P00748 615 aaPredicted RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 ITGA2BP08514 1039 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 HGFP14210 728 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 RGRP47804 291 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 NDST2P52849 883 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 AIF1P55008 147 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 INHBCP55103 352 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 OGDHQ02218 1023 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 UBXN1Q04323 297 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 CLN3Q13286 438 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 KCTD16Q68DU8 428 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 INO80CQ6PI98 192 aaPredicted RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 LVRNQ6Q4G3 990 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 RAB11FIP2Q7L804 512 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 CLEC14AQ86T13 490 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 CAMK1DQ8IU85 385 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 FBXO39Q8N4B4 442 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 PLA2G15Q8NCC3 412 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 ANKRD20A12PQ8NF67 263 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 HCAR2Q8TDS4 363 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 WBP1Q96G27 269 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 PDXPQ96GD0 296 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 LIN37Q96GY3 246 aaPredicted RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 WDR92Q96MX6 357 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 ZNF641Q96N77 438 aaPredicted RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 CNPY3Q9BT09 278 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 SLC39A8Q9C0K1 460 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 DHX35Q9H5Z1 703 aaKnown RBP10.41□□□□□ -0.74
CLRN3-201ENST00000368671 LRRC19Q9H756 370 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 MOSPD1Q9UJG1 213 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 AP4E1Q9UPM8 1137 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 ATP8A1Q9Y2Q0 1164 aa10.41□□□□□ -0.74
CLRN3-201ENST00000368671 A0A1W2PQM1 296 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 ARHGAP42A6NI28 874 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 LGALS16A8MUM7 142 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 A8MX80 341 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 TMCO5BA8MYB1 307 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 D6RAR5 112 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 J3QKU1 62 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 DFFAO00273 331 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 CACNB4O00305 520 aaPredicted RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 EEF2KO00418 725 aaKnown RBP10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PLD2O14939 933 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 DAPK3O43293 454 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PRAMEF11O60813 436 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PALMO75781 387 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 KRT10P13645 584 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 PSMA2P25787 234 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 SERPINA4P29622 427 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 SLC5A2P31639 672 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 UGT1A5P35504 534 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 MMP12P39900 470 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 RALGDSQ12967 914 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 MTM1Q13496 603 aa10.4□□□□□ -0.74
CLRN3-201ENST00000368671 CA9Q16790 459 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms