RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PSMD3O43242 534 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 SLC4A1P02730 911 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 APRTP07741 180 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 CYP2A6P11509 494 aaPredicted RBP13.96□□□□□ -0.17
TPM3-211ENST00000368531 HNF1BP35680 557 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 PTGIRP43119 386 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 DR1Q01658 176 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 ELF2Q15723 593 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 PLK5Q496M5 336 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 SEL1L3Q68CR1 1132 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 USP45Q70EL2 814 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 TSPAN33Q86UF1 283 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 SLC41A1Q8IVJ1 513 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 TRIM51Q9BSJ1 452 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 DUSP15Q9H1R2 295 aaPredicted RBP13.96□□□□□ -0.17
TPM3-211ENST00000368531 PREBQ9HCU5 417 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 PIH1D1Q9NWS0 290 aaKnown RBP13.96□□□□□ -0.17
TPM3-211ENST00000368531 ASIC3Q9UHC3 531 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 PCYOX1Q9UHG3 505 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 ZFR2Q9UPR6 939 aaKnown RBP13.96□□□□□ -0.17
TPM3-211ENST00000368531 COQ6Q9Y2Z9 468 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 NEU2Q9Y3R4 380 aa13.96□□□□□ -0.17
TPM3-211ENST00000368531 MYLKQ15746 1914 aa13.96□□□□□ -0.18
TPM3-211ENST00000368531 PLXNA2O75051 1894 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 A0A0J9YYE9 177 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 LOC285095A0A1B0GVY8 99 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 IGLON5A6NGN9 336 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 METTL12A8MUP2 240 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 SLC31A1O15431 190 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TTI1O43156 1089 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TSPAN6O43657 245 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 AP1G1O43747 822 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 RHOBTB1O94844 696 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TRBC1P01850 177 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 ATXN1LP0C7T5 689 aaKnown RBP13.95□□□□□ -0.18
TPM3-211ENST00000368531 NFKBIAP25963 317 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 VIPR1P32241 457 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 MMP12P39900 470 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 ADCY8P40145 1251 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 PTGER3P43115 390 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 GRIA4P48058 902 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 SUOXP51687 545 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
TPM3-211ENST00000368531 RALGDSQ12967 914 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TUBB2AQ13885 445 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 ARHGEF7Q14155 803 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 SLC1A5Q15758 541 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TMEM52BQ4KMG9 183 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 KCTD11Q693B1 232 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 C4orf22Q6V702 233 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 DPPA4Q7L190 304 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 C11orf74Q86VG3 221 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 RGL4Q8IZJ4 473 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 SCRN2Q96FV2 425 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 MYOCQ99972 504 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TUBB2BQ9BVA1 445 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 IRF2BPLQ9H1B7 796 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 KDM4CQ9H3R0 1056 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 EIF2B4Q9UI10 523 aaKnown RBP13.95□□□□□ -0.18
TPM3-211ENST00000368531 RAB23Q9ULC3 237 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 RPL26L1Q9UNX3 145 aaKnown RBP13.95□□□□□ -0.18
TPM3-211ENST00000368531 SHOC2Q9UQ13 582 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 SPAG17Q6Q759 2223 aa13.95□□□□□ -0.18
TPM3-211ENST00000368531 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 CAPN8A6NHC0 703 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 CLDN7O95471 211 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 AP2A1O95782 977 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 PAK4O96013 591 aaPredicted RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 EPOP01588 193 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 TPH1P17752 444 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 ADRA1AP35348 466 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 LIG3P49916 1009 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 ACOX1Q15067 660 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 CRTC1Q6UUV9 634 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 RANBP10Q6VN20 620 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 LIPIQ6XZB0 460 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 PPP1R21Q6ZMI0 780 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
TPM3-211ENST00000368531 HORMAD1Q86X24 394 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 JAMLQ86YT9 394 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 CADM4Q8NFZ8 388 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 KCNH6Q9H252 994 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 PPIL1Q9Y3C6 166 aa13.94□□□□□ -0.18
TPM3-211ENST00000368531 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms