RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 AUTS2Q8WXX7 1259 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ING5Q8WYH8 240 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TEKT5Q96M29 485 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 LINC00032P0C843 101 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CES1P23141 567 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CRHR1P34998 444 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 RPS24P62847 133 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 GPRIN3Q6ZVF9 776 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 PLD3Q8IV08 490 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 RIN3Q8TB24 985 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 AGAP11Q8TF27 550 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 RPL10LQ96L21 214 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 GKN1Q9NS71 199 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SORCS3Q9UPU3 1222 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 Q9Y3F1 56 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ARVCFO00192 962 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 AZIN1O14977 448 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 SNRPB2P08579 225 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 HNF4AP41235 474 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 SLC16A1P53985 500 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ATP6V0D1P61421 351 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RPL38P63173 70 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 KIAA1324Q6UXG2 1013 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RCN3Q96D15 328 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 FUBP3Q96I24 572 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PHACTR1Q9C0D0 580 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 SLC12A4Q9UP95 1085 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 C1QTNF3-AMACRE9PGA6 284 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 EFCAB14O75071 495 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 MLYCDO95822 493 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PKMP14618 531 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PRMT9Q6P2P2 845 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 METTL3Q86U44 580 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 DCBLD1Q8N8Z6 715 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 BHLHE22Q8NFJ8 381 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 TMEM79Q9BSE2 394 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ITM2BQ9Y287 266 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 TCAF1Q9Y4C2 921 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 M0R3G1 203 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PSMG1O95456 288 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 KCNE1P15382 129 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 GSSP48637 474 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ANXA11P50995 505 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 FSTL4Q6MZW2 842 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 ADCK1Q86TW2 530 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RASAL3Q86YV0 1011 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 TPD52L3Q96J77 140 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 FCF1Q9Y324 198 aaKnown RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RGSL1A5PLK6 1076 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 LDLRP01130 860 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 COX7A2P14406 83 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 FGFR3P22607 806 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 WASP42768 502 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RDH11Q8TC12 318 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 TLCD1Q96CP7 247 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 CXorf56Q9H5V9 222 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 RNPEPL1Q9HAU8 725 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPRK-203ENST00000368207 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 MYH6P13533 1939 aa12.34□□□□□ -0.43
PTPRK-203ENST00000368207 UGT1A9O60656 530 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 C8AP07357 584 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 GSTM1P09488 218 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 EDNRBP24530 442 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 LIMK2P53671 638 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 DLG2Q15700 870 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 CYP2A13Q16696 494 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 C1orf220Q5T0J3 134 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 CLYBLQ8N0X4 340 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 ABHD8Q96I13 439 aa12.33□□□□□ -0.44
PTPRK-203ENST00000368207 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms